RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ABI1Q8IZP0 508 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 ZNF710Q8N1W2 664 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 MICAL1Q8TDZ2 1067 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 PRPF31Q8WWY3 499 aaKnown RBP13.03□□□□□ -0.32
VTI1A-208ENST00000494728 CEP170P1Q96L14 293 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 ZNF558Q96NG5 402 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 TRAIPQ9BWF2 469 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 VN1R3Q9BXE9 311 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 TMEM60Q9H2L4 133 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 AAASQ9NRG9 546 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 AGPAT5Q9NUQ2 364 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 FAM105AQ9NUU6 356 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 MUTYHQ9UIF7 546 aa13.03□□□□□ -0.32
VTI1A-208ENST00000494728 TRIP11Q15643 1979 aa13.02□□□□□ -0.32
VTI1A-208ENST00000494728 A0A087WWV3 80 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 POTEMA6NI47 508 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 SLITRK3O94933 977 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 HOXA11P31270 313 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-208ENST00000494728 DNM2P50570 870 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 GUCY1B3Q02153 619 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 LAMTOR4Q0VGL1 99 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 UBXN11Q5T124 520 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 ERICH6BQ5W0A0 696 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 CATSPER4Q7RTX7 472 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 FEZF2Q8TBJ5 459 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 SLC7A3Q8WY07 619 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 WASF1Q92558 559 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 PPP2R3CQ969Q6 453 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 KIF2CQ99661 725 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 EIF2AK1Q9BQI3 630 aaKnown RBP13.02□□□□□ -0.33
VTI1A-208ENST00000494728 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 CHST12Q9NRB3 414 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 TBC1D13Q9NVG8 400 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 DACT1Q9NYF0 836 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 DNAJB4Q9UDY4 337 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 FAM50BQ9Y247 325 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 LZTS1Q9Y250 596 aa13.02□□□□□ -0.33
VTI1A-208ENST00000494728 CACNA1HO95180 2353 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 DCXO43602 365 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 ZC3H11AO75152 810 aaKnown RBP eCLIP13.01□□□□□ -0.33
VTI1A-208ENST00000494728 EOMESO95936 686 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 SRGAP2CP0DJJ0 459 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 BCAR1P56945 870 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 CSPP1Q1MSJ5 1256 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 XKR9Q5GH70 373 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 AGMOQ6ZNB7 445 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 CCDC83Q8IWF9 413 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 TPH2Q8IWU9 490 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 ASAP3Q8TDY4 903 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 AUTS2Q8WXX7 1259 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 SUSD6Q92537 303 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 MTMR9Q96QG7 549 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 HSD17B14Q9BPX1 270 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 APOL5Q9BWW9 433 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 NRDE2Q9H7Z3 1164 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 SPG21Q9NZD8 308 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 INPP5FQ9Y2H2 1132 aa13.01□□□□□ -0.33
VTI1A-208ENST00000494728 NEMFO60524 1076 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 OFD1O75665 1012 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 PPM1AP35813 382 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 RFC5P40937 340 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 CALCRLQ16602 461 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 C8orf34Q49A92 452 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 SYCE2Q6PIF2 218 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 FERMT3Q86UX7 667 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 ZNF280BQ86YH2 543 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 RNF135Q8IUD6 432 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 SLFN12Q8IYM2 578 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 RNF149Q8NC42 400 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 PSPC1Q8WXF1 523 aaKnown RBP13□□□□□ -0.33
VTI1A-208ENST00000494728 NAP1L4Q99733 375 aaKnown RBP13□□□□□ -0.33
VTI1A-208ENST00000494728 MRPL9Q9BYD2 267 aaKnown RBP13□□□□□ -0.33
VTI1A-208ENST00000494728 ZBP1Q9H171 429 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 ZSWIM4Q9H7M6 989 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 TTC12Q9H892 705 aaPredicted RBP13□□□□□ -0.33
VTI1A-208ENST00000494728 BRMS1Q9HCU9 246 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 PCDHB2Q9Y5E7 798 aa13□□□□□ -0.33
VTI1A-208ENST00000494728 C2orf71A6NGG8 1288 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 PRR33A8MZF0 331 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 LOC730098B7Z3J9 87 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 MARCH6O60337 910 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 TSPAN1O60635 241 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 ZNF623O75123 536 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 DDHD2O94830 711 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 PLA2G5P39877 138 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 TXKP42681 527 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 SLC11A1P49279 550 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 CDC42EP1Q00587 391 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 CAPSQ13938 189 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 AMHR2Q16671 573 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 NOMO2Q5JPE7 1267 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 ANKRD54Q6NXT1 300 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 TMEM184AQ6ZMB5 413 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 SMG8Q8ND04 991 aaKnown RBP12.99□□□□□ -0.33
VTI1A-208ENST00000494728 PIGOQ8TEQ8 1089 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 MTRQ99707 1265 aa12.99□□□□□ -0.33
VTI1A-208ENST00000494728 JPH2Q9BR39 696 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-208ENST00000494728 EIF2AQ9BY44 585 aaKnown RBP12.99□□□□□ -0.33
VTI1A-208ENST00000494728 GBP3Q9H0R5 595 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms