RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 HIST1H2AJQ99878 128 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 C1QTNF3Q9BXJ4 246 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 SLC13A1Q9BZW2 595 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 TMEM168Q9H0V1 697 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 KCTD10Q9H3F6 313 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 CDC42EP3Q9UKI2 254 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 DENND2AQ9ULE3 1009 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 LUC7L2Q9Y383 392 aaKnown RBP3.67□□□□□ -1.82
LRIF1-203ENST00000494675 PCDHB6Q9Y5E3 794 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 EID1Q9Y6B2 187 aa3.67□□□□□ -1.82
LRIF1-203ENST00000494675 A0A0G2JNJ9 132 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 NPEPPSL1A6NEC2 478 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 PFKMP08237 780 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 CT47B1P0C2W7 299 aaPredicted RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 OSMP13725 252 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 MRPS9P82933 396 aaKnown RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 PPARAQ07869 468 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 SPIDRQ14159 915 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 BMP8AQ7Z5Y6 402 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 CDYL2Q8N8U2 506 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 DYDC2Q96IM9 177 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 YTHDC1Q96MU7 727 aaKnown RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 CDK5RAP1Q96SZ6 601 aaKnown RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 MRIQ9BWK5 157 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 Q9UFV3 132 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 DPP7Q9UHL4 492 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 PRSS50Q9UI38 385 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 MAGEL2Q9UJ55 1249 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 TMPRSS11EQ9UL52 423 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 A0A0A6YYJ9 748 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 E2F8A0AVK6 867 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 LAMTOR5O43504 91 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 AKAP10O43572 662 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 CUTAO60888 179 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 COL6A1P12109 1028 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 XPAP23025 273 aaPredicted RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 POLD1P28340 1107 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 RECQLP46063 649 aaPredicted RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 KCNQ1P51787 676 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 SLC5A3P53794 718 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 CDK17Q00537 523 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 PIN1Q13526 163 aaPredicted RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 TRIM25Q14258 630 aaKnown RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 EFCAB2Q5VUJ9 269 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 RAVER1Q8IY67 606 aaKnown RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 IFNL2Q8IZJ0 200 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 OR5AN1Q8NGI8 311 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 AUTS2Q8WXX7 1259 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 PITHD1Q9GZP4 211 aaPredicted RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 JADE2Q9NQC1 790 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 ZIM2Q9NZV7 527 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 SAE1Q9UBE0 346 aaPredicted RBP3.66□□□□□ -1.82
LRIF1-203ENST00000494675 IP6K2Q9UHH9 426 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 GPR45Q9Y5Y3 372 aa3.66□□□□□ -1.82
LRIF1-203ENST00000494675 PCDHGA12O60330 932 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 MARCH6O60337 910 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 NRP2O60462 931 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 MAFO75444 373 aaPredicted RBP3.65□□□□□ -1.83
LRIF1-203ENST00000494675 KLHL18O94889 574 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 PARNO95453 639 aaKnown RBP3.65□□□□□ -1.83
LRIF1-203ENST00000494675 HMGCRP04035 888 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 GPR15P49685 360 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 ANTXR2P58335 489 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 KRT85P78386 507 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 PPP2R5AQ15172 486 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 MUM1Q2TAK8 710 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 KCNK18Q7Z418 384 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 LIMS2Q7Z4I7 341 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 LYSMD2Q8IV50 215 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 FMNL3Q8IVF7 1028 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 KLHL36Q8N4N3 616 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 NUDT10Q8NFP7 164 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 SH3RF3Q8TEJ3 882 aaPredicted RBP3.65□□□□□ -1.83
LRIF1-203ENST00000494675 NUDT11Q96G61 164 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 SLC2A13Q96QE2 648 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 PRDM12Q9H4Q4 367 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 SLITRK6Q9H5Y7 841 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 ST6GALNAC2Q9UJ37 374 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 ZNF180Q9UJW8 692 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 ZBTB21Q9ULJ3 1066 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 PCDHGA9Q9Y5G4 932 aaKnown RBP3.65□□□□□ -1.83
LRIF1-203ENST00000494675 PCDHGA8Q9Y5G5 932 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 PCDHGA7Q9Y5G6 932 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 PCDHGA6Q9Y5G7 932 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 PCDHGA3Q9Y5H0 932 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 PCDHGA2Q9Y5H1 932 aa3.65□□□□□ -1.83
LRIF1-203ENST00000494675 FZD9O00144 591 aa3.64□□□□□ -1.83
LRIF1-203ENST00000494675 ZSCAN20P17040 1043 aaPredicted RBP3.64□□□□□ -1.83
LRIF1-203ENST00000494675 AGXTP21549 392 aa3.64□□□□□ -1.83
LRIF1-203ENST00000494675 MTNR1BP49286 362 aa3.64□□□□□ -1.83
LRIF1-203ENST00000494675 STAT5BP51692 787 aa3.64□□□□□ -1.83
LRIF1-203ENST00000494675 NRG3P56975 720 aa3.64□□□□□ -1.83
LRIF1-203ENST00000494675 CCT2P78371 535 aaKnown RBP3.64□□□□□ -1.83
LRIF1-203ENST00000494675 HNRNPA0Q13151 305 aaKnown RBP3.64□□□□□ -1.83
LRIF1-203ENST00000494675 ODF1Q14990 250 aa3.64□□□□□ -1.83
LRIF1-203ENST00000494675 EIF4HQ15056 248 aaKnown RBP3.64□□□□□ -1.83
LRIF1-203ENST00000494675 NFE2Q16621 373 aaPredicted RBP3.64□□□□□ -1.83
LRIF1-203ENST00000494675 CCDC178Q5BJE1 867 aa3.64□□□□□ -1.83
LRIF1-203ENST00000494675 TMEM200BQ69YZ2 307 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms