RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 TUFT1Q9NNX1 390 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 FAM105AQ9NUU6 356 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 TTC28Q96AY4 2481 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 FNDC1Q4ZHG4 1894 aaPredicted RBP17.37■□□□□ 0.37
LIMS2-216ENST00000494613 PTENP60484 403 aa17.37■□□□□ 0.37
LIMS2-216ENST00000494613 PLCB3Q01970 1234 aa17.37■□□□□ 0.37
LIMS2-216ENST00000494613 UBE3AQ05086 875 aa17.37■□□□□ 0.37
LIMS2-216ENST00000494613 POU5F1BQ06416 359 aa17.37■□□□□ 0.37
LIMS2-216ENST00000494613 DLX2Q07687 328 aaPredicted RBP17.37■□□□□ 0.37
LIMS2-216ENST00000494613 NBR1Q14596 966 aa17.37■□□□□ 0.37
LIMS2-216ENST00000494613 PTCRAQ6ISU1 281 aaPredicted RBP17.37■□□□□ 0.37
LIMS2-216ENST00000494613 ADGRD2Q7Z7M1 963 aa17.37■□□□□ 0.37
LIMS2-216ENST00000494613 RBM23Q86U06 439 aaKnown RBP17.37■□□□□ 0.37
LIMS2-216ENST00000494613 NACC1Q96RE7 527 aa17.37■□□□□ 0.37
LIMS2-216ENST00000494613 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
LIMS2-216ENST00000494613 PCDHB2Q9Y5E7 798 aa17.37■□□□□ 0.37
LIMS2-216ENST00000494613 PCDHGC5Q9Y5F6 944 aa17.37■□□□□ 0.37
LIMS2-216ENST00000494613 MEIS3P2A8K0S8 358 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 LINC01565O15544 149 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 OFD1O75665 1012 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 RPA1P27694 616 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 PBX3P40426 434 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 PDIA5Q14554 519 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 PUS10Q3MIT2 529 aaKnown RBP17.36■□□□□ 0.37
LIMS2-216ENST00000494613 MAEAQ7L5Y9 396 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 MRPL10Q7Z7H8 261 aaKnown RBP17.36■□□□□ 0.37
LIMS2-216ENST00000494613 ZNF558Q96NG5 402 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 TBC1D32Q96NH3 1257 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 AGPAT5Q9NUQ2 364 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 SPG21Q9NZD8 308 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 PUF60Q9UHX1 559 aaKnown RBP17.36■□□□□ 0.37
LIMS2-216ENST00000494613 DBR1Q9UK59 544 aaKnown RBP17.36■□□□□ 0.37
LIMS2-216ENST00000494613 PCDHB6Q9Y5E3 794 aa17.36■□□□□ 0.37
LIMS2-216ENST00000494613 PER2O15055 1255 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 NRIP1P48552 1158 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 KRT17Q04695 432 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 PTGDRQ13258 359 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 TFDP1Q14186 410 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 UBXN11Q5T124 520 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 FAM178BQ8IXR5 827 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 LRRC43Q8N309 656 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 ERMNQ8TAM6 284 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 ASAP3Q8TDY4 903 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 MRPS27Q92552 414 aaKnown RBP17.35■□□□□ 0.37
LIMS2-216ENST00000494613 PPP2R3CQ969Q6 453 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 CCDC43Q96MW1 224 aaKnown RBP17.35■□□□□ 0.37
LIMS2-216ENST00000494613 TLE6Q9H808 572 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 CD320Q9NPF0 282 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 TLR9Q9NR96 1032 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 LZTS1Q9Y250 596 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 BRWD1Q9NSI6 2320 aa17.35■□□□□ 0.37
LIMS2-216ENST00000494613 NT5C1B-RDH14C9J2C7 533 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 IL9P15248 144 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 GLRA2P23416 452 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 GJB2P29033 226 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 ALDH7A1P49419 539 aaKnown RBP17.34■□□□□ 0.37
LIMS2-216ENST00000494613 MCM2P49736 904 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 FXR2P51116 673 aaKnown RBP eCLIP17.34■□□□□ 0.37
LIMS2-216ENST00000494613 RAB27AP51159 221 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 BCAR1P56945 870 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 NCBP1Q09161 790 aaKnown RBP17.34■□□□□ 0.37
LIMS2-216ENST00000494613 ECM1Q16610 540 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 NOMO2Q5JPE7 1267 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 MCTP1Q6DN14 999 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 PDE12Q6L8Q7 609 aaKnown RBP17.34■□□□□ 0.37
LIMS2-216ENST00000494613 AGMOQ6ZNB7 445 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 IFNLR1Q8IU57 520 aaPredicted RBP17.34■□□□□ 0.37
LIMS2-216ENST00000494613 EFHBQ8N7U6 833 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 LRWD1Q9UFC0 647 aa17.34■□□□□ 0.37
LIMS2-216ENST00000494613 INO80B-WBP1J3KQ70 363 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 FSCN2O14926 492 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 USO1O60763 962 aaKnown RBP17.33■□□□□ 0.36
LIMS2-216ENST00000494613 ERLIN2O94905 339 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 AXLP30530 894 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 CAPSQ13938 189 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 PCBP1Q15365 356 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■■■■ 32.7
LIMS2-216ENST00000494613 POTEGQ6S5H5 508 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 GLB1LQ6UWU2 654 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 CPB2Q96IY4 423 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 MRPL9Q9BYD2 267 aaKnown RBP17.33■□□□□ 0.36
LIMS2-216ENST00000494613 POLR3FQ9H1D9 316 aaPredicted RBP17.33■□□□□ 0.36
LIMS2-216ENST00000494613 NRDE2Q9H7Z3 1164 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 GPRC5CQ9NQ84 441 aa17.33■□□□□ 0.36
LIMS2-216ENST00000494613 TSPAN1O60635 241 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 MUTP22033 750 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 PPM1AP35813 382 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 CCT6AP40227 531 aaKnown RBP17.32■□□□□ 0.36
LIMS2-216ENST00000494613 AFF1P51825 1210 aaKnown RBP17.32■□□□□ 0.36
LIMS2-216ENST00000494613 MBTD1Q05BQ5 628 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 CLUL1Q15846 466 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 IL17AQ16552 155 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 PADI6Q6TGC4 694 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 TMC7Q7Z402 723 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 SLC39A11Q8N1S5 342 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 SMG8Q8ND04 991 aaKnown RBP17.32■□□□□ 0.36
LIMS2-216ENST00000494613 RSPH1Q8WYR4 309 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 NFKBIZQ9BYH8 718 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms