RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FGF18O76093 207 aa36.92■■■■□ 3.5
CBX4-203ENST00000494546 ARL2P36404 184 aa36.92■■■■□ 3.5
CBX4-203ENST00000494546 RAB27AP51159 221 aa36.92■■■■□ 3.5
CBX4-203ENST00000494546 CSPP1Q1MSJ5 1256 aa36.92■■■■□ 3.5
CBX4-203ENST00000494546 HAUS3Q68CZ6 603 aa36.92■■■■□ 3.5
CBX4-203ENST00000494546 MAEAQ7L5Y9 396 aa36.92■■■■□ 3.5
CBX4-203ENST00000494546 POLR3FQ9H1D9 316 aaPredicted RBP36.92■■■■□ 3.5
CBX4-203ENST00000494546 LRWD1Q9UFC0 647 aa36.92■■■■□ 3.5
CBX4-203ENST00000494546 DBR1Q9UK59 544 aaKnown RBP36.92■■■■□ 3.5
CBX4-203ENST00000494546 ERLIN2O94905 339 aa36.91■■■■□ 3.5
CBX4-203ENST00000494546 CCT6AP40227 531 aaKnown RBP36.91■■■■□ 3.5
CBX4-203ENST00000494546 PTENP60484 403 aa36.91■■■■□ 3.5
CBX4-203ENST00000494546 PABPC5Q96DU9 382 aaKnown RBP36.91■■■■□ 3.5
CBX4-203ENST00000494546 NECAB3Q96P71 396 aaPredicted RBP36.91■■■■□ 3.5
CBX4-203ENST00000494546 BACH2Q9BYV9 841 aa36.91■■■■□ 3.5
CBX4-203ENST00000494546 TCF20Q9UGU0 1960 aaKnown RBP36.9■■■■□ 3.5
CBX4-203ENST00000494546 SPTBN5Q9NRC6 3674 aaKnown RBP36.9■■■■□ 3.5
CBX4-203ENST00000494546 GLRA2P23416 452 aa36.9■■■■□ 3.5
CBX4-203ENST00000494546 IRS1P35568 1242 aa36.9■■■■□ 3.5
CBX4-203ENST00000494546 HYAL1Q12794 435 aa36.9■■■■□ 3.5
CBX4-203ENST00000494546 CAPSQ13938 189 aa36.9■■■■□ 3.5
CBX4-203ENST00000494546 IGFLR1Q9H665 355 aa36.9■■■■□ 3.5
CBX4-203ENST00000494546 CLDND1Q9NY35 253 aa36.9■■■■□ 3.5
CBX4-203ENST00000494546 PCDHB2Q9Y5E7 798 aa36.9■■■■□ 3.5
CBX4-203ENST00000494546 ATG2AQ2TAZ0 1938 aa36.89■■■■□ 3.5
CBX4-203ENST00000494546 MYO7AQ13402 2215 aa36.89■■■■□ 3.5
CBX4-203ENST00000494546 INO80B-WBP1J3KQ70 363 aa36.89■■■■□ 3.5
CBX4-203ENST00000494546 HOXA11P31270 313 aaPredicted RBP36.89■■■■□ 3.5
CBX4-203ENST00000494546 ZNF558Q96NG5 402 aa36.89■■■■□ 3.5
CBX4-203ENST00000494546 MRPL9Q9BYD2 267 aaKnown RBP36.89■■■■□ 3.5
CBX4-203ENST00000494546 GPRC5CQ9NQ84 441 aa36.89■■■■□ 3.5
CBX4-203ENST00000494546 ZNF623O75123 536 aa36.88■■■■□ 3.49
CBX4-203ENST00000494546 PBX3P40426 434 aa36.88■■■■□ 3.49
CBX4-203ENST00000494546 UBE3AQ05086 875 aa36.88■■■■□ 3.49
CBX4-203ENST00000494546 LEXMQ3ZCV2 418 aa36.88■■■■□ 3.49
CBX4-203ENST00000494546 RILPL1Q5EBL4 403 aa36.88■■■■□ 3.49
CBX4-203ENST00000494546 KCNT2Q6UVM3 1135 aa36.88■■■■□ 3.49
CBX4-203ENST00000494546 MICAL1Q8TDZ2 1067 aa36.88■■■■□ 3.49
CBX4-203ENST00000494546 RAB34Q9BZG1 259 aa36.88■■■■□ 3.49
CBX4-203ENST00000494546 EIF4ENIF1Q9NRA8 985 aaKnown RBP36.88■■■■□ 3.49
CBX4-203ENST00000494546 ARHGEF35A5YM69 484 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 MEIS3P2A8K0S8 358 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 H3BQ06 376 aaPredicted RBP36.87■■■■□ 3.49
CBX4-203ENST00000494546 TNFRSF10AO00220 468 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 LAD1O00515 517 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 NCK2O43639 380 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 GTF2F1P35269 517 aaKnown RBP eCLIP36.87■■■■□ 3.494e-27■■■■■ 205.7
CBX4-203ENST00000494546 POU5F1BQ06416 359 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 PDIA5Q14554 519 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 LARP1BQ659C4 914 aaKnown RBP36.87■■■■□ 3.49
CBX4-203ENST00000494546 PADI6Q6TGC4 694 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 GLB1LQ6UWU2 654 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 MCPH1Q8NEM0 835 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 PPP2R3CQ969Q6 453 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 PGBD4Q96DM1 585 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 PCDHGC5Q9Y5F6 944 aa36.87■■■■□ 3.49
CBX4-203ENST00000494546 PLXNA4Q9HCM2 1894 aa36.86■■■■□ 3.49
CBX4-203ENST00000494546 TSPAN1O60635 241 aa36.86■■■■□ 3.49
CBX4-203ENST00000494546 MUTP22033 750 aa36.86■■■■□ 3.49
CBX4-203ENST00000494546 COL19A1Q14993 1142 aa36.86■■■■□ 3.49
CBX4-203ENST00000494546 ECM1Q16610 540 aa36.86■■■■□ 3.49
CBX4-203ENST00000494546 ADGRD2Q7Z7M1 963 aa36.86■■■■□ 3.49
CBX4-203ENST00000494546 TLR9Q9NR96 1032 aa36.86■■■■□ 3.49
CBX4-203ENST00000494546 INPP5FQ9Y2H2 1132 aa36.86■■■■□ 3.49
CBX4-203ENST00000494546 BRWD1Q9NSI6 2320 aa36.85■■■■□ 3.49
CBX4-203ENST00000494546 MBTD1Q05BQ5 628 aa36.85■■■■□ 3.49
CBX4-203ENST00000494546 NCBP1Q09161 790 aaKnown RBP36.85■■■■□ 3.49
CBX4-203ENST00000494546 PCBP1Q15365 356 aaKnown RBP eCLIP36.85■■■■□ 3.49
CBX4-203ENST00000494546 IFNLR1Q8IU57 520 aaPredicted RBP36.85■■■■□ 3.49
CBX4-203ENST00000494546 IGSF22Q8N9C0 903 aa36.85■■■■□ 3.49
CBX4-203ENST00000494546 SNX29Q8TEQ0 813 aa36.85■■■■□ 3.49
CBX4-203ENST00000494546 PPM1AP35813 382 aa36.84■■■■□ 3.49
CBX4-203ENST00000494546 PRPHP41219 470 aa36.84■■■■□ 3.49
CBX4-203ENST00000494546 UBXN11Q5T124 520 aa36.84■■■■□ 3.49
CBX4-203ENST00000494546 DTHD1Q6ZMT9 781 aa36.84■■■■□ 3.49
CBX4-203ENST00000494546 GADD45GIP1Q8TAE8 222 aaPredicted RBP36.84■■■■□ 3.49
CBX4-203ENST00000494546 CPB2Q96IY4 423 aa36.84■■■■□ 3.49
CBX4-203ENST00000494546 SPG21Q9NZD8 308 aa36.84■■■■□ 3.49
CBX4-203ENST00000494546 KIAA1024Q9UPX6 916 aa36.84■■■■□ 3.49
CBX4-203ENST00000494546 STK24Q9Y6E0 443 aa36.84■■■■□ 3.49
CBX4-203ENST00000494546 LRRIQ4A6NIV6 560 aa36.83■■■■□ 3.49
CBX4-203ENST00000494546 AXLP30530 894 aa36.83■■■■□ 3.49
CBX4-203ENST00000494546 PLCB3Q01970 1234 aa36.83■■■■□ 3.49
CBX4-203ENST00000494546 IL17AQ16552 155 aa36.83■■■■□ 3.49
CBX4-203ENST00000494546 NOMO2Q5JPE7 1267 aa36.83■■■■□ 3.49
CBX4-203ENST00000494546 RSPH1Q8WYR4 309 aa36.83■■■■□ 3.49
CBX4-203ENST00000494546 MRPS27Q92552 414 aaKnown RBP36.83■■■■□ 3.49
CBX4-203ENST00000494546 NFKBIZQ9BYH8 718 aa36.83■■■■□ 3.49
CBX4-203ENST00000494546 DDX19AQ9NUU7 478 aaKnown RBP36.83■■■■□ 3.49
CBX4-203ENST00000494546 PUF60Q9UHX1 559 aaKnown RBP36.83■■■■□ 3.49
CBX4-203ENST00000494546 PP2D1A8MPX8 630 aa36.82■■■■□ 3.48
CBX4-203ENST00000494546 OFD1O75665 1012 aa36.82■■■■□ 3.48
CBX4-203ENST00000494546 ERVFC1P60507 584 aa36.82■■■■□ 3.48
CBX4-203ENST00000494546 CTC1Q2NKJ3 1217 aa36.82■■■■□ 3.48
CBX4-203ENST00000494546 PTCRAQ6ISU1 281 aaPredicted RBP36.82■■■■□ 3.48
CBX4-203ENST00000494546 NOTUMQ6P988 496 aa36.82■■■■□ 3.48
CBX4-203ENST00000494546 RBM23Q86U06 439 aaKnown RBP36.82■■■■□ 3.48
CBX4-203ENST00000494546 TTC28Q96AY4 2481 aa36.81■■■■□ 3.48
CBX4-203ENST00000494546 CYP11B2P19099 503 aa36.81■■■■□ 3.48
CBX4-203ENST00000494546 NRIP1P48552 1158 aa36.81■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms