RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CATSPER4Q7RTX7 472 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 BMP8AQ7Z5Y6 402 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 VPS52Q8N1B4 723 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 FBXL6Q8N531 539 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 MRPL43Q8N983 215 aaKnown RBP14.19□□□□□ -0.14
SKA1-205ENST00000494518 RDM1Q8NG50 284 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 FEZF2Q8TBJ5 459 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 BCL7CQ8WUZ0 217 aaPredicted RBP14.19□□□□□ -0.14
SKA1-205ENST00000494518 CASP10Q92851 521 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 MRPL9Q9BYD2 267 aaKnown RBP14.19□□□□□ -0.14
SKA1-205ENST00000494518 SLKQ9H2G2 1235 aaPredicted RBP14.19□□□□□ -0.14
SKA1-205ENST00000494518 SMOC2Q9H3U7 446 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 ZSWIM6Q9HCJ5 1215 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 GJB4Q9NTQ9 266 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 FAM86C1Q9NVL1 165 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 CYP46A1Q9Y6A2 500 aa14.19□□□□□ -0.14
SKA1-205ENST00000494518 TDRD15B5MCY1 1934 aaKnown RBP14.19□□□□□ -0.14
SKA1-205ENST00000494518 DENND4AQ7Z401 1863 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 MYO15AQ9UKN7 3530 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 IGKV6-21A0A0C4DH24 114 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 C2CD4DB7Z1M9 353 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 B4GALT3O60512 393 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 MAFO75444 373 aaPredicted RBP14.18□□□□□ -0.14
SKA1-205ENST00000494518 HOXB8P17481 243 aaPredicted RBP14.18□□□□□ -0.14
SKA1-205ENST00000494518 NONOQ15233 471 aaKnown RBP eCLIP14.18□□□□□ -0.14
SKA1-205ENST00000494518 ZNF710Q8N1W2 664 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
SKA1-205ENST00000494518 MBOAT7Q96N66 472 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 C22orf23Q9BZE7 217 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 ZBP1Q9H171 429 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 NRDE2Q9H7Z3 1164 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 FAM105AQ9NUU6 356 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 TBC1D13Q9NVG8 400 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 DNAJB4Q9UDY4 337 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 PLXNA3P51805 1871 aa14.18□□□□□ -0.14
SKA1-205ENST00000494518 SSBP05455 408 aaKnown RBP eCLIP14.17□□□□□ -0.14
SKA1-205ENST00000494518 EPCAMP16422 314 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 PSMC5P62195 406 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 RNASELQ05823 741 aaKnown RBP14.17□□□□□ -0.14
SKA1-205ENST00000494518 TCF15Q12870 199 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 TPRNQ4KMQ1 711 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 NOMO2Q5JPE7 1267 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 CES5AQ6NT32 575 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 GLB1LQ6UWU2 654 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 KRT25Q7Z3Z0 450 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 ZNF410Q86VK4 478 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 TMEM87AQ8NBN3 555 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 DAGLBQ8NCG7 672 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 KREMEN2Q8NCW0 462 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 TMEM143Q96AN5 459 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 ASIC4Q96FT7 647 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 ZNF274Q96GC6 653 aaPredicted RBP14.17□□□□□ -0.14
SKA1-205ENST00000494518 CHST12Q9NRB3 414 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 WRAP73Q9P2S5 460 aaPredicted RBP14.17□□□□□ -0.14
SKA1-205ENST00000494518 VAV3Q9UKW4 847 aa14.17□□□□□ -0.14
SKA1-205ENST00000494518 DMDP11532 3685 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 CCDC194A0A1B0GVG4 234 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 OFD1O75665 1012 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 ASGR2P07307 311 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 GALTP07902 379 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 SRGAP2CP0DJJ0 459 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 SLC11A1P49279 550 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 AFF1P51825 1210 aaKnown RBP14.16□□□□□ -0.14
SKA1-205ENST00000494518 PTPN5P54829 565 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 CPLX2Q6PUV4 134 aaKnown RBP14.16□□□□□ -0.14
SKA1-205ENST00000494518 ZNF280BQ86YH2 543 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 OXER1Q8TDS5 423 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 IGSF21Q96ID5 467 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 CEP170P1Q96L14 293 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 VN1R3Q9BXE9 311 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 ADAM7Q9H2U9 754 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 MINDY3Q9H8M7 445 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 CYP26B1Q9NR63 512 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 PDRG1Q9NUG6 133 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 NR2E1Q9Y466 385 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 PCDHB2Q9Y5E7 798 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 COL4A3BPQ9Y5P4 624 aa14.16□□□□□ -0.14
SKA1-205ENST00000494518 PTPRZ1P23471 2315 aaPredicted RBP14.15□□□□□ -0.14
SKA1-205ENST00000494518 RIF1Q5UIP0 2472 aaKnown RBP14.15□□□□□ -0.14
SKA1-205ENST00000494518 FAM205CA6NFA0 338 aa14.15□□□□□ -0.14
SKA1-205ENST00000494518 QARSP47897 775 aaKnown RBP14.15□□□□□ -0.14
SKA1-205ENST00000494518 POLGP54098 1239 aaPredicted RBP14.15□□□□□ -0.14
SKA1-205ENST00000494518 CDC42EP1Q00587 391 aa14.15□□□□□ -0.14
SKA1-205ENST00000494518 SCRN1Q12765 414 aa14.15□□□□□ -0.14
SKA1-205ENST00000494518 NCAPH2Q6IBW4 605 aa14.15□□□□□ -0.14
SKA1-205ENST00000494518 MOXD1Q6UVY6 613 aa14.15□□□□□ -0.14
SKA1-205ENST00000494518 AGMOQ6ZNB7 445 aa14.15□□□□□ -0.14
SKA1-205ENST00000494518 PIK3AP1Q6ZUJ8 805 aa14.15□□□□□ -0.14
SKA1-205ENST00000494518 INO80BQ9C086 356 aaPredicted RBP14.15□□□□□ -0.14
SKA1-205ENST00000494518 IFT122Q9HBG6 1241 aa14.15□□□□□ -0.14
SKA1-205ENST00000494518 AGPAT5Q9NUQ2 364 aa14.15□□□□□ -0.14
SKA1-205ENST00000494518 SPTBN4Q9H254 2564 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 ZBTB39O15060 712 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 MARCH6O60337 910 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 CCNT1O60563 726 aaKnown RBP14.14□□□□□ -0.15
SKA1-205ENST00000494518 BRD1O95696 1058 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 POMCP01189 267 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 CTSAP10619 480 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 SKIP12755 728 aa14.14□□□□□ -0.15
SKA1-205ENST00000494518 AVPR2P30518 371 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms