RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TWF2Q6IBS0 349 aaKnown RBP14.67□□□□□ -0.06
ERCC3-209ENST00000494464 CATSPER3Q86XQ3 398 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
ERCC3-209ENST00000494464 ABI1Q8IZP0 508 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 C4orf32Q8N8J7 132 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 KLHL23Q8NBE8 558 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 RNF149Q8NC42 400 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 ERMNQ8TAM6 284 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 ADAMTS19Q8TE59 1207 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 PIGOQ8TEQ8 1089 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 CWH43Q9H720 699 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 DBR1Q9UK59 544 aaKnown RBP14.67□□□□□ -0.06
ERCC3-209ENST00000494464 PCDHB12Q9Y5F1 795 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 BRWD1Q9NSI6 2320 aa14.67□□□□□ -0.06
ERCC3-209ENST00000494464 LAD1O00515 517 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 SRGAP2CP0DJJ0 459 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 KCNQ1P51787 676 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 CAMK1Q14012 370 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 TFDP1Q14186 410 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 SKOR2Q2VWA4 1001 aaPredicted RBP14.66□□□□□ -0.06
ERCC3-209ENST00000494464 COLGALT1Q8NBJ5 622 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 SPPL3Q8TCT6 385 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 PABPC5Q96DU9 382 aaKnown RBP14.66□□□□□ -0.06
ERCC3-209ENST00000494464 MRPL9Q9BYD2 267 aaKnown RBP14.66□□□□□ -0.06
ERCC3-209ENST00000494464 NFKBIZQ9BYH8 718 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 MINDY3Q9H8M7 445 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 ALG13Q9NP73 1137 aaKnown RBP14.66□□□□□ -0.06
ERCC3-209ENST00000494464 FAM105AQ9NUU6 356 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 TYW1Q9NV66 732 aaKnown RBP14.66□□□□□ -0.06
ERCC3-209ENST00000494464 HCSTQ9UBK5 93 aa14.66□□□□□ -0.06
ERCC3-209ENST00000494464 NCK2O43639 380 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 ZNF623O75123 536 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 ARL2P36404 184 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 PRPHP41219 470 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 PTENP60484 403 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 CAPSQ13938 189 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 RILPL1Q5EBL4 403 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 SPOUT1Q5T280 376 aaKnown RBP14.65□□□□□ -0.06
ERCC3-209ENST00000494464 POTEGQ6S5H5 508 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 IGSF22Q8N9C0 903 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 MCPH1Q8NEM0 835 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 NACC1Q96RE7 527 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 UHRF1Q96T88 793 aaPredicted RBP14.65□□□□□ -0.06
ERCC3-209ENST00000494464 PCDHB6Q9Y5E3 794 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 STK24Q9Y6E0 443 aa14.65□□□□□ -0.06
ERCC3-209ENST00000494464 TCF20Q9UGU0 1960 aaKnown RBP14.64□□□□□ -0.07
ERCC3-209ENST00000494464 H3BQV1 296 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 STX6O43752 255 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 USO1O60763 962 aaKnown RBP14.64□□□□□ -0.07
ERCC3-209ENST00000494464 FGF18O76093 207 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 PDCP20941 246 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 GLRA2P23416 452 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 DNAJB1P25685 340 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 PPM1AP35813 382 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 PTGDRQ13258 359 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 PDIA5Q14554 519 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 LEXMQ3ZCV2 418 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 LRRC55Q6ZSA7 311 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 RNF169Q8NCN4 708 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 HELQQ8TDG4 1101 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 ASAP3Q8TDY4 903 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 POF1BQ8WVV4 589 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 PPP2R3CQ969Q6 453 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 RAB34Q9BZG1 259 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.64□□□□□ -0.07
ERCC3-209ENST00000494464 LZTS1Q9Y250 596 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 TTC28Q96AY4 2481 aa14.64□□□□□ -0.07
ERCC3-209ENST00000494464 TRAK2O60296 914 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 ERLIN2O94905 339 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 ZSCAN22P10073 491 aaPredicted RBP14.63□□□□□ -0.07
ERCC3-209ENST00000494464 SYT1P21579 422 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 KCNA5P22460 613 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 AXLP30530 894 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 HOXA11P31270 313 aaPredicted RBP14.63□□□□□ -0.07
ERCC3-209ENST00000494464 PLCB3Q01970 1234 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 HYAL1Q12794 435 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 CTC1Q2NKJ3 1217 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 KCNT2Q6UVM3 1135 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 THNSL1Q8IYQ7 743 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 CCDC51Q96ER9 411 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 ZNF558Q96NG5 402 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 POLR3FQ9H1D9 316 aaPredicted RBP14.63□□□□□ -0.07
ERCC3-209ENST00000494464 LRWD1Q9UFC0 647 aa14.63□□□□□ -0.07
ERCC3-209ENST00000494464 CNTNAP2Q9UHC6 1331 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 CARNS1A5YM72 827 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 TNFRSF10AO00220 468 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 TSPAN1O60635 241 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 IRS1P35568 1242 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 CCT6AP40227 531 aaKnown RBP14.62□□□□□ -0.07
ERCC3-209ENST00000494464 MBTD1Q05BQ5 628 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 GSE1Q14687 1217 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 NOTUMQ6P988 496 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 GLB1LQ6UWU2 654 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 PGBD4Q96DM1 585 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 TLR9Q9NR96 1032 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 PCDHB2Q9Y5E7 798 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 MYO7AQ13402 2215 aa14.62□□□□□ -0.07
ERCC3-209ENST00000494464 A0A087WWV3 80 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 ARHGEF35A5YM69 484 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms