RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 FAM50AQ14320 339 aaKnown RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 MTERF2Q49AM1 385 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 PRAMEF18Q5VWM3 479 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 SLC43A3Q8NBI5 491 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 TXNDC5Q8NBS9 432 aaKnown RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 EPN3Q9H201 632 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 PANK3Q9H999 370 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 ASH2LQ9UBL3 628 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 STAP2Q9UGK3 403 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 PCDHA8Q9Y5H6 950 aa3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 AHDC1Q5TGY3 1603 aaPredicted RBP3.1□□□□□ -1.91
CDC42EP3-205ENST00000494083 ZRANB2O95218 330 aaKnown RBP eCLIP3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 TUSC3Q13454 348 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 HSP90AA2PQ14568 343 aaPredicted RBP3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 TM4SF20Q53R12 229 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 PIBF1Q8WXW3 757 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 TOE1Q96GM8 510 aaKnown RBP3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 CCDC140Q96MF4 163 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 KRTAP3-1Q9BYR8 98 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 CHMP5Q9NZZ3 219 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 NAV1Q8NEY1 1877 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 SOD2P04179 222 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 FGFR1P11362 822 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 GNAT1P11488 350 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 COL6A1P12109 1028 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 SSRP1Q08945 709 aaKnown RBP3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 RASA3Q14644 834 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 MUM1L1Q5H9M0 696 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 STYK1Q6J9G0 422 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 TTLL7Q6ZT98 887 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 OTOP3Q7RTS5 596 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 PLA2G4DQ86XP0 818 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 TICAM2Q86XR7 235 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 ST13P5Q8NFI4 369 aaPredicted RBP3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 MBD6Q96DN6 1003 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 SLC6A20Q9NP91 592 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 PTPN22Q9Y2R2 807 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 UTYO14607 1347 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 SALL1Q9NSC2 1324 aa3.09□□□□□ -1.91
CDC42EP3-205ENST00000494083 ACOT7O00154 380 aa3.09□□□□□ -1.92
CDC42EP3-205ENST00000494083 PDPK1O15530 556 aa3.09□□□□□ -1.92
CDC42EP3-205ENST00000494083 H2AFXP16104 143 aaPredicted RBP3.09□□□□□ -1.92
CDC42EP3-205ENST00000494083 RBM15Q96T37 977 aaKnown RBP eCLIP3.09□□□□□ -1.92
CDC42EP3-205ENST00000494083 L2HGDHQ9H9P8 463 aa3.09□□□□□ -1.92
CDC42EP3-205ENST00000494083 BCAR3O75815 825 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 STK10O94804 968 aaKnown RBP3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 GLRBP48167 497 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 SKIDA1Q1XH10 827 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 PMFBP1Q8TBY8 1022 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 KRTAP4-5Q9BYR2 181 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 CTNNA3Q9UI47 895 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 ELP1O95163 1332 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 C10orf71Q711Q0 1435 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 FAM237AA0A1B0GTK4 181 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 FAM153BP0C7A2 387 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 IL13P35225 146 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 EFEMP1Q12805 493 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 KIZQ2M2Z5 673 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 EMC10Q5UCC4 262 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 CD276Q5ZPR3 534 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 SARM1Q6SZW1 724 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 DPH6Q7L8W6 267 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 DHX37Q8IY37 1157 aaKnown RBP3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 NUDT10Q8NFP7 164 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 NUDT11Q96G61 164 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 C8orf49Q96NF6 230 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 DNAJC2Q99543 621 aaKnown RBP3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 PAGR1Q9BTK6 254 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 TMX1Q9H3N1 280 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 SLC39A2Q9NP94 309 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 ZFP69BQ9UJL9 534 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 CBLCQ9ULV8 474 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 PCDHA9Q9Y5H5 950 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 ADGRF5Q8IZF2 1346 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 MED23Q9ULK4 1368 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 TNS2Q63HR2 1409 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 TRAV20A0A0B4J274 112 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 CLSTN1O94985 981 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 CKMP06732 381 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 SRGAP2CP0DJJ0 459 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 PDE6AP16499 860 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 CAPN2P17655 700 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 NCLP19338 710 aaKnown RBP3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 SEC23AQ15436 765 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 ATP2B3Q16720 1220 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 LRSAM1Q6UWE0 723 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 CKAP2LQ8IYA6 745 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 UBXN4Q92575 508 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 SGSM3Q96HU1 749 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 SPATA9Q9BWV2 254 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 SSBP3Q9BWW4 388 aaPredicted RBP3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 SMOC1Q9H4F8 434 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 ZNF446Q9NWS9 450 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 ST6GALNAC2Q9UJ37 374 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 DSEQ9UL01 958 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 TNNQ9UQP3 1299 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 TTC41PQ6P2S7 1318 aa3.08□□□□□ -1.92
CDC42EP3-205ENST00000494083 MROH6A6NGR9 719 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 KRIT1O00522 736 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms