RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PDRG1Q9NUG6 133 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 CLDND1Q9NY35 253 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 PCDHB8Q9UN66 801 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 PCDHA4Q9UN74 947 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 CEP83Q9Y592 693 aa9.11□□□□□ -0.95
HDAC6-234ENST00000493923 TECTAO75443 2155 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 CYP3A7-CYP3A51PA0A087WV96 503 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 TBKBP1A7MCY6 615 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 WDR64B1ANS9 1081 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 WNT7AO00755 349 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 GAS7O60861 476 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 OATP04181 439 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 RB1P06400 928 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 IVLP07476 585 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 TPM1P09493 284 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 CCDC172P0C7W6 258 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 FDPSP14324 419 aaKnown RBP9.1□□□□□ -0.95
HDAC6-234ENST00000493923 CYP3A7P24462 503 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 CRYBB1P53674 252 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-234ENST00000493923 NLRP11P59045 1033 aaKnown RBP9.1□□□□□ -0.95
HDAC6-234ENST00000493923 FAM189BP81408 668 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 ST3GAL1Q11201 340 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 PTPROQ16827 1216 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 Q4G0T1 1027 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 TIGD5Q53EQ6 642 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 LRCH2Q5VUJ6 765 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 EFCAB12Q6NXP0 572 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 LRRC55Q6ZSA7 311 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 EP400NLQ6ZTU2 488 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 NECAB1Q8N987 351 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 DAGLBQ8NCG7 672 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 RNF214Q8ND24 703 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 CCDC148Q8NFR7 591 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 VN1R2Q8NFZ6 395 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 TSC1Q92574 1164 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 PABPC5Q96DU9 382 aaKnown RBP9.1□□□□□ -0.95
HDAC6-234ENST00000493923 INTS4Q96HW7 963 aaKnown RBP9.1□□□□□ -0.95
HDAC6-234ENST00000493923 CWH43Q9H720 699 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 SH3GLB2Q9NR46 395 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 RGS18Q9NS28 235 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-234ENST00000493923 WRAP73Q9P2S5 460 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-234ENST00000493923 SAMM50Q9Y512 469 aa9.1□□□□□ -0.95
HDAC6-234ENST00000493923 ERICH4A6NGS2 130 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 M0QZ92 97 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 PFKFB2O60825 505 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 DEXIO95424 95 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 GLP2RO95838 553 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 MMP1P03956 469 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 ATF7P17544 494 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-234ENST00000493923 PBX3P40426 434 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 GPC3P51654 580 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 USP11P51784 963 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 AK2P54819 239 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 HNRNPH2P55795 449 aaKnown RBP9.09□□□□□ -0.95
HDAC6-234ENST00000493923 ERVFC1P60507 584 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 SATB1Q01826 763 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 MTERF2Q49AM1 385 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 PLA2G4FQ68DD2 849 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 KSR1Q8IVT5 923 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 BICD2Q8TD16 824 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 POF1BQ8WVV4 589 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 HAS1Q92839 578 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 RIT2Q99578 217 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 LRFN3Q9BTN0 628 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 C11orf84Q9BUA3 381 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-234ENST00000493923 PHF20Q9BVI0 1012 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 TEKT3Q9BXF9 490 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 FTHL17Q9BXU8 183 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 OCEL1Q9H607 264 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 TTC12Q9H892 705 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-234ENST00000493923 PLSCR2Q9NRY7 297 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 TYW1Q9NV66 732 aaKnown RBP9.09□□□□□ -0.95
HDAC6-234ENST00000493923 PSD3Q9NYI0 1048 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 CLEC1BQ9P126 229 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 VAV3Q9UKW4 847 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 AKT3Q9Y243 479 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 ZDBF2Q9HCK1 2354 aa9.09□□□□□ -0.95
HDAC6-234ENST00000493923 ZNF318Q5VUA4 2279 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 PIEZO1Q92508 2521 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 DENND3A2RUS2 1198 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 MEIS3P2A8K0S8 358 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 PER2O15055 1255 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 ZBTB39O15060 712 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 EPB41L2O43491 1005 aaKnown RBP9.08□□□□□ -0.96
HDAC6-234ENST00000493923 STAG3L1P0CL83 205 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 TNNT1P13805 278 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 FOSBP53539 338 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 NPEPPSP55786 919 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 ZP2Q05996 745 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 NR5A1Q13285 461 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 ADAM15Q13444 863 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 CLLU1OSQ5K130 101 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 MCTP2Q6DN12 878 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 ANO5Q75V66 913 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 MIER3Q7Z3K6 550 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 RBM23Q86U06 439 aaKnown RBP9.08□□□□□ -0.96
HDAC6-234ENST00000493923 TRIM22Q8IYM9 498 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 GJD3Q8N144 294 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 IQUBQ8NA54 791 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms