RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 PHF20Q9BVI0 1012 aa11.51□□□□□ -0.57
NUDCD3-210ENST00000493613 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
NUDCD3-210ENST00000493613 FAM105AQ9NUU6 356 aa11.51□□□□□ -0.57
NUDCD3-210ENST00000493613 CDH22Q9UJ99 828 aa11.51□□□□□ -0.57
NUDCD3-210ENST00000493613 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 CARNS1A5YM72 827 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 MEIS3P2A8K0S8 358 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 EML1O00423 815 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 DKC1O60832 514 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 CLASP2O75122 1294 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 CDKL5O76039 1030 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 CXCL14O95715 111 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 XBP1P17861 261 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 QARSP47897 775 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 RAB27AP51159 221 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 NPEPPSP55786 919 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 ITIH3Q06033 890 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 NOMO2Q5JPE7 1267 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 NEK8Q86SG6 692 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 TMEM173Q86WV6 379 aaPredicted RBP11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 FBXL6Q8N531 539 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 TMEM87AQ8NBN3 555 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 SLC7A3Q8WY07 619 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 FAM20AQ96MK3 541 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 ZBP1Q9H171 429 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 ADAM7Q9H2U9 754 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 IFT122Q9HBG6 1241 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 KCNMB3Q9NPA1 279 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 TBC1D13Q9NVG8 400 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 VAV3Q9UKW4 847 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 INPP5FQ9Y2H2 1132 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 NR2E1Q9Y466 385 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 COL4A3BPQ9Y5P4 624 aa11.5□□□□□ -0.57
NUDCD3-210ENST00000493613 MYO15AQ9UKN7 3530 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 CCNT1O60563 726 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 DTNBO60941 627 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 ZNF623O75123 536 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 P4HBP07237 508 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 GCFC2P16383 781 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 SCRN1Q12765 414 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 IER5LQ5T953 404 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 PPP4R3AQ6IN85 833 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 DDX53Q86TM3 631 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 EXOC8Q8IYI6 725 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 PRSS33Q8NF86 280 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 PRPF31Q8WWY3 499 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 AUTS2Q8WXX7 1259 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 PGBD4Q96DM1 585 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 ASIC4Q96FT7 647 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 IGSF21Q96ID5 467 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 CEP170P1Q96L14 293 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 NECTIN4Q96NY8 510 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 PRRX2Q99811 253 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 GBP3Q9H0R5 595 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 POMKQ9H5K3 350 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 NRDE2Q9H7Z3 1164 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 GJB4Q9NTQ9 266 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 AGPAT5Q9NUQ2 364 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 WRAP73Q9P2S5 460 aaPredicted RBP11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 DNAJB4Q9UDY4 337 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 STK36Q9NRP7 1315 aa11.49□□□□□ -0.57
NUDCD3-210ENST00000493613 ZDBF2Q9HCK1 2354 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 TBX3O15119 743 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 MARCH6O60337 910 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 OFD1O75665 1012 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 GALTP07902 379 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 SRGAP2CP0DJJ0 459 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 CTSAP10619 480 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 RFC5P40937 340 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 MTHFRP42898 656 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 PTPN5P54829 565 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 GIT2Q14161 759 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 RARS2Q5T160 578 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 PIK3AP1Q6ZUJ8 805 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 URGCPQ8TCY9 931 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 BCL7CQ8WUZ0 217 aaPredicted RBP11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 PSPC1Q8WXF1 523 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 HAS1Q92839 578 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 TMEM143Q96AN5 459 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 RIPOR3Q96MK2 946 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 NAP1L4Q99733 375 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 LXNQ9BS40 222 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 DHX33Q9H6R0 707 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 BMP2KQ9NSY1 1161 aaPredicted RBP11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 DZANK1Q9NVP4 752 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 TPCN1Q9ULQ1 816 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 PPME1Q9Y570 386 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 PCDHB2Q9Y5E7 798 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 IRAK3Q9Y616 596 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 VPS13AQ96RL7 3174 aa11.48□□□□□ -0.57
NUDCD3-210ENST00000493613 TRIP11Q15643 1979 aa11.47□□□□□ -0.57
NUDCD3-210ENST00000493613 C2CD4DB7Z1M9 353 aa11.47□□□□□ -0.57
NUDCD3-210ENST00000493613 GAS2O43903 313 aaKnown RBP11.47□□□□□ -0.57
NUDCD3-210ENST00000493613 B4GALT3O60512 393 aa11.47□□□□□ -0.57
NUDCD3-210ENST00000493613 NEFLP07196 543 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms