RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SLC39A2Q9NP94 309 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 BRD7Q9NPI1 651 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 CGNQ9P2M7 1197 aaKnown RBP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 MYO1AQ9UBC5 1043 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 FBXO40Q9UH90 709 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 DAAM1Q9Y4D1 1078 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 VWA5AO00534 786 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 TEX33O43247 280 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 MED24O75448 989 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 LYPLA2O95372 231 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 FCER1AP12319 257 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 ALAS1P13196 640 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 TRIM21P19474 475 aaKnown RBP11.04□□□□□ -0.64
PRPF3-206ENST00000493553 SCP2P22307 547 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 CASP14P31944 242 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 KRT9P35527 623 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 CYLC1P35663 651 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-206ENST00000493553 SNRPFP62306 86 aaKnown RBP11.04□□□□□ -0.64
PRPF3-206ENST00000493553 SNRPNP63162 240 aaKnown RBP11.04□□□□□ -0.64
PRPF3-206ENST00000493553 KRT83P78385 493 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 SFSWAPQ12872 951 aaKnown RBP11.04□□□□□ -0.64
PRPF3-206ENST00000493553 BMT2Q1RMZ1 405 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 VWA3BQ502W6 1294 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 IER5Q5VY09 327 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 RNF207Q6ZRF8 634 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 CREBRFQ8IUR6 639 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 CCDC170Q8IYT3 715 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 C17orf53Q8N3J3 647 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-206ENST00000493553 LRRC15Q8TF66 581 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 CLEC4DQ8WXI8 215 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 DCPSQ96C86 337 aaKnown RBP11.04□□□□□ -0.64
PRPF3-206ENST00000493553 BTBD6Q96KE9 485 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 IWS1Q96ST2 819 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 DNAJC7Q99615 494 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 TEX13BQ9BXU2 312 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 SEMA6BQ9H3T3 888 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 ZSWIM4Q9H7M6 989 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 LUC7LQ9NQ29 371 aaKnown RBP11.04□□□□□ -0.64
PRPF3-206ENST00000493553 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 FBXO28Q9NVF7 368 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 TRAF3IP3Q9Y228 551 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 PPP2R2CQ9Y2T4 447 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 UBIAD1Q9Y5Z9 338 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 CSADQ9Y600 493 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 ZNF536O15090 1300 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 ZNF541Q9H0D2 1346 aa11.04□□□□□ -0.64
PRPF3-206ENST00000493553 MYH7BA7E2Y1 1941 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 E9PMD0 336 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 TRAF5O00463 557 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 SLC16A3O15427 465 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 KIF5CO60282 957 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 FAM13AO94988 1023 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 GYPCP04921 128 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 P4HBP07237 508 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 HOXB4P17483 251 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 GUCY2CP25092 1073 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 CCND2P30279 289 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 IREB2P48200 963 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 ADKP55263 362 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 PCBP4P57723 403 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 GIT2Q14161 759 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 MYBPC2Q14324 1141 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 NFIL3Q16649 462 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 CCDC40Q4G0X9 1142 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 ZCWPW2Q504Y3 356 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 MIER3Q7Z3K6 550 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 KCNK18Q7Z418 384 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 FRMD5Q7Z6J6 570 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 TMEM139Q8IV31 216 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 ZC3H3Q8IXZ2 948 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 CHST13Q8NET6 341 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 SYTL5Q8TDW5 730 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 NSUN6Q8TEA1 469 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 GPRASP2Q96D09 838 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 CCDC43Q96MW1 224 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 MPHOSPH6Q99547 160 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 NDST4Q9H3R1 872 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 PARVGQ9HBI0 331 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 ABHD10Q9NUJ1 306 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 TRMT1Q9NXH9 659 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 GGA3Q9NZ52 723 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 DBR1Q9UK59 544 aaKnown RBP11.03□□□□□ -0.64
PRPF3-206ENST00000493553 MKL2Q9ULH7 1088 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 ZMIZ1Q9ULJ6 1067 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 ADAMTS5Q9UNA0 930 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 ZHX2Q9Y6X8 837 aa11.03□□□□□ -0.64
PRPF3-206ENST00000493553 ARHGEF35A5YM69 484 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 TRIM49BA6NDI0 452 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 UNCXA6NJT0 531 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 SLITRK3O94933 977 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 AMPD1P23109 780 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 STAT3P40763 770 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 PMS1P54277 932 aaKnown RBP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 PABPC4Q13310 644 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 MTMR1Q13613 665 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 ECM1Q16610 540 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 KNOP1Q1ED39 458 aaKnown RBP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 GNPTABQ3T906 1256 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 ARHGEF16Q5VV41 709 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms