RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 SPON2Q9BUD6 331 aa5.7□□□□□ -1.5
CLIP4-212ENST00000493551 TEX13AQ9BXU3 409 aaPredicted RBP5.7□□□□□ -1.5
CLIP4-212ENST00000493551 RNF186Q9NXI6 227 aa5.7□□□□□ -1.5
CLIP4-212ENST00000493551 ASTN2O75129 1339 aaPredicted RBP5.7□□□□□ -1.5
CLIP4-212ENST00000493551 SNED1Q8TER0 1413 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 EPHX1P07099 455 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 PRKAR2BP31323 418 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 NOGQ13253 232 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 GNPTABQ3T906 1256 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 SUSD4Q5VX71 490 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 FBXW10Q5XX13 1052 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 RGMBQ6NW40 437 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 RUFY4Q6ZNE9 571 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 MOB2Q70IA6 237 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 SND1Q7KZF4 910 aaKnown RBP eCLIP5.69□□□□□ -1.5
CLIP4-212ENST00000493551 KRT26Q7Z3Y9 468 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 COPS5Q92905 334 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 PHACTR3Q96KR7 559 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 CRAMP1Q96RY5 1269 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 LMF1Q96S06 567 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 THUMPD2Q9BTF0 503 aaKnown RBP5.69□□□□□ -1.5
CLIP4-212ENST00000493551 CNOT7Q9UIV1 285 aaKnown RBP5.69□□□□□ -1.5
CLIP4-212ENST00000493551 HDAC9Q9UKV0 1011 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 UBN2Q6ZU65 1347 aa5.69□□□□□ -1.5
CLIP4-212ENST00000493551 KLRG2A4D1S0 409 aaPredicted RBP5.68□□□□□ -1.5
CLIP4-212ENST00000493551 SNRPA1P09661 255 aaKnown RBP5.68□□□□□ -1.5
CLIP4-212ENST00000493551 COMTP21964 271 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 TEPPQ6URK8 271 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 DPP8Q6V1X1 898 aaPredicted RBP5.68□□□□□ -1.5
CLIP4-212ENST00000493551 KIF6Q6ZMV9 814 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 CTU1Q7Z7A3 348 aaKnown RBP5.68□□□□□ -1.5
CLIP4-212ENST00000493551 Q8N1Y9 231 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 GIMAP8Q8ND71 665 aaPredicted RBP5.68□□□□□ -1.5
CLIP4-212ENST00000493551 RBM17Q96I25 401 aaKnown RBP5.68□□□□□ -1.5
CLIP4-212ENST00000493551 FGD4Q96M96 766 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 PHAXQ9H814 394 aaKnown RBP5.68□□□□□ -1.5
CLIP4-212ENST00000493551 DBNDD1Q9H9R9 158 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 GBA2Q9HCG7 927 aaPredicted RBP5.68□□□□□ -1.5
CLIP4-212ENST00000493551 SLC12A7Q9Y666 1083 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 SLC4A7Q9Y6M7 1214 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 ABCC4O15439 1325 aa5.68□□□□□ -1.5
CLIP4-212ENST00000493551 SIPA1L3O60292 1781 aaPredicted RBP5.67□□□□□ -1.5
CLIP4-212ENST00000493551 YDJCA8MPS7 323 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 H7C1D1 291 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 ANXA1P04083 346 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 FPR2P25090 351 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 CRY2Q49AN0 593 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 CLEC4GQ6UXB4 293 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 C2orf69Q8N8R5 385 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 NEU4Q8WWR8 484 aaPredicted RBP5.67□□□□□ -1.5
CLIP4-212ENST00000493551 EXTL1Q92935 676 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 ZG16BQ96DA0 208 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 PCGF6Q9BYE7 350 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 NYXQ9GZU5 481 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 TMX4Q9H1E5 349 aaPredicted RBP5.67□□□□□ -1.5
CLIP4-212ENST00000493551 GGA3Q9NZ52 723 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 SUGT1Q9Y2Z0 365 aa5.67□□□□□ -1.5
CLIP4-212ENST00000493551 TNRC18O15417 2968 aaPredicted RBP5.66□□□□□ -1.5
CLIP4-212ENST00000493551 PSMD14O00487 310 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 RPL11P62913 178 aaKnown RBP5.66□□□□□ -1.5
CLIP4-212ENST00000493551 SCRN1Q12765 414 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 PRKG1Q13976 671 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 HABP4Q5JVS0 413 aaKnown RBP5.66□□□□□ -1.5
CLIP4-212ENST00000493551 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 RTF1Q92541 710 aaKnown RBP5.66□□□□□ -1.5
CLIP4-212ENST00000493551 DCPSQ96C86 337 aaKnown RBP5.66□□□□□ -1.5
CLIP4-212ENST00000493551 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 LRRC37BQ96QE4 947 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 GPRC5CQ9NQ84 441 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 ATP6V0A2Q9Y487 856 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 X6R8D5 127 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 MAP3K15Q6ZN16 1313 aa5.66□□□□□ -1.5
CLIP4-212ENST00000493551 COL3A1P02461 1466 aaPredicted RBP5.65□□□□□ -1.5
CLIP4-212ENST00000493551 UBE2Q2LH0YL09 131 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 NTSR2O95665 410 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 U2AF1L5P0DN76 240 aaPredicted RBP5.65□□□□□ -1.5
CLIP4-212ENST00000493551 COL6A1P12109 1028 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 DGCR2P98153 550 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 U2AF1Q01081 240 aaKnown RBP eCLIP5.65□□□□□ -1.5
CLIP4-212ENST00000493551 SLC7A5Q01650 507 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 AIMP1Q12904 312 aaKnown RBP5.65□□□□□ -1.5
CLIP4-212ENST00000493551 TNIP1Q15025 636 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 INF2Q27J81 1249 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 AGBL4Q5VU57 503 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 Q6ZUG5 572 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 RASAL3Q86YV0 1011 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 ARRDC4Q8NCT1 418 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 CDCA5Q96FF9 252 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 TRMT2BQ96GJ1 504 aaKnown RBP5.65□□□□□ -1.5
CLIP4-212ENST00000493551 R3HDMLQ9H3Y0 253 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 WASF3Q9UPY6 502 aa5.65□□□□□ -1.5
CLIP4-212ENST00000493551 TIMM13Q9Y5L4 95 aaPredicted RBP5.65□□□□□ -1.5
CLIP4-212ENST00000493551 CEMIPQ8WUJ3 1361 aa5.65□□□□□ -1.51
CLIP4-212ENST00000493551 RIC1Q4ADV7 1423 aa5.65□□□□□ -1.51
CLIP4-212ENST00000493551 HGSO14964 777 aaPredicted RBP5.64□□□□□ -1.51
CLIP4-212ENST00000493551 KLHL18O94889 574 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 LRG1P02750 347 aa5.64□□□□□ -1.51
CLIP4-212ENST00000493551 EIF2S2P20042 333 aaKnown RBP5.64□□□□□ -1.51
CLIP4-212ENST00000493551 GTF2A2P52657 109 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms