RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 B3GNT9Q6UX72 402 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 MIER3Q7Z3K6 550 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 FRMD5Q7Z6J6 570 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 CABP7Q86V35 215 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 RHPN2Q8IUC4 686 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 TMEM87AQ8NBN3 555 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 JAKMIP1Q96N16 626 aaKnown RBP15.41■□□□□ 0.06
SAMM50-204ENST00000493161 NCOA5Q9HCD5 579 aaKnown RBP15.41■□□□□ 0.06
SAMM50-204ENST00000493161 FAM105AQ9NUU6 356 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 SUCLA2Q9P2R7 463 aaPredicted RBP15.41■□□□□ 0.06
SAMM50-204ENST00000493161 VPS13AQ96RL7 3174 aa15.41■□□□□ 0.06
SAMM50-204ENST00000493161 DENND4AQ7Z401 1863 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 DDHD2O94830 711 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 NPR3P17342 541 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 SFPQP23246 707 aaKnown RBP eCLIP15.4■□□□□ 0.06
SAMM50-204ENST00000493161 USP11P51784 963 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 BMS1Q14692 1282 aaKnown RBP15.4■□□□□ 0.06
SAMM50-204ENST00000493161 XKR3Q5GH77 459 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 PLA2G4FQ68DD2 849 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 GLB1LQ6UWU2 654 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 BICD2Q8TD16 824 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 TBCKQ8TEA7 893 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 KCNB2Q92953 911 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 MFSD1Q9H3U5 465 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 CYP26B1Q9NR63 512 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 USTQ9Y2C2 406 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 SNX14Q9Y5W7 946 aa15.4■□□□□ 0.06
SAMM50-204ENST00000493161 MAFO75444 373 aaPredicted RBP15.39■□□□□ 0.05
SAMM50-204ENST00000493161 CNPP09543 421 aaKnown RBP15.39■□□□□ 0.05
SAMM50-204ENST00000493161 CLCN4P51793 760 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 CCT2P78371 535 aaKnown RBP15.39■□□□□ 0.05
SAMM50-204ENST00000493161 AKAP17AQ02040 695 aaKnown RBP15.39■□□□□ 0.05
SAMM50-204ENST00000493161 RNASELQ05823 741 aaKnown RBP15.39■□□□□ 0.05
SAMM50-204ENST00000493161 Q4G0T1 1027 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 AGMOQ6ZNB7 445 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 ANO5Q75V66 913 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 CATSPER4Q7RTX7 472 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 GPR149Q86SP6 731 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 ZNF579Q8NAF0 562 aaKnown RBP15.39■□□□□ 0.05
SAMM50-204ENST00000493161 FLCNQ8NFG4 579 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 CCDC148Q8NFR7 591 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 NLRP4Q96MN2 994 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 KLHL5Q96PQ7 755 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 RNF26Q9BY78 433 aaPredicted RBP15.39■□□□□ 0.05
SAMM50-204ENST00000493161 IFT122Q9HBG6 1241 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 DMDP11532 3685 aa15.39■□□□□ 0.05
SAMM50-204ENST00000493161 LILRB3O75022 631 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 N4BP1O75113 896 aaKnown RBP15.38■□□□□ 0.05
SAMM50-204ENST00000493161 ZNF623O75123 536 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 MYBP10242 640 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 IFNAR1P17181 557 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 DNM2P50570 870 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 CLCN5P51795 746 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 NLRP5P59047 1200 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 CDC42EP1Q00587 391 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 GIT2Q14161 759 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 BLOC1S2Q6QNY1 142 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 ZNF410Q86VK4 478 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 SFXN1Q9H9B4 322 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 PCDHB2Q9Y5E7 798 aa15.38■□□□□ 0.05
SAMM50-204ENST00000493161 CYP3A7-CYP3A51PA0A087WV96 503 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 EML1O00423 815 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 CDC45O75419 566 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 SKIP12755 728 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 RPS6KB1P23443 525 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 CYP3A7P24462 503 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 KLRC2P26717 231 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 PDIA3P30101 505 aaKnown RBP15.37■□□□□ 0.05
SAMM50-204ENST00000493161 HOXA11P31270 313 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-204ENST00000493161 NPEPPSP55786 919 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 UBXN11Q5T124 520 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 TAS1R1Q7RTX1 841 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 RDM1Q8NG50 284 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 AGXT2Q9BYV1 514 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 INO80BQ9C086 356 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-204ENST00000493161 MINDY3Q9H8M7 445 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 KCNK12Q9HB15 430 aa15.37■□□□□ 0.05
SAMM50-204ENST00000493161 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-204ENST00000493161 C2orf16Q68DN1 1984 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 M0R2N6 131 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 C2CD2LO14523 706 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 NARSO43776 548 aaKnown RBP15.36■□□□□ 0.05
SAMM50-204ENST00000493161 SLC37A4O43826 429 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 POMCP01189 267 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 HSPA4P34932 840 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 RAB27AP51159 221 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 TDGQ13569 410 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 NPY5RQ15761 445 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 CCDC149Q6ZUS6 474 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 OTOP3Q7RTS5 596 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 MRPL10Q7Z7H8 261 aaKnown RBP15.36■□□□□ 0.05
SAMM50-204ENST00000493161 PPFIBP1Q86W92 1011 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 SIX5Q8N196 739 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 FBXL16Q8N461 479 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 RSAD2Q8WXG1 361 aa15.36■□□□□ 0.05
SAMM50-204ENST00000493161 ACSF2Q96CM8 615 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms