RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 TLR9Q9NR96 1032 aa12.81□□□□□ -0.36
LRTM1-202ENST00000493075 AGPAT5Q9NUQ2 364 aa12.81□□□□□ -0.36
LRTM1-202ENST00000493075 FAM105AQ9NUU6 356 aa12.81□□□□□ -0.36
LRTM1-202ENST00000493075 PRKAG3Q9UGI9 489 aa12.81□□□□□ -0.36
LRTM1-202ENST00000493075 PIN4Q9Y237 131 aaKnown RBP12.81□□□□□ -0.36
LRTM1-202ENST00000493075 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
LRTM1-202ENST00000493075 TTC28Q96AY4 2481 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 RALGAPA2Q2PPJ7 1873 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 FSCN2O14926 492 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 ST18O60284 1047 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 SPATA31C1P0DKV0 1188 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 IL9P15248 144 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 ATP2B1P20020 1258 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 MUTP22033 750 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 AXLP30530 894 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 HOXA11P31270 313 aaPredicted RBP12.8□□□□□ -0.36
LRTM1-202ENST00000493075 ARL2P36404 184 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 RARRES1P49788 294 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 PTENP60484 403 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 TFDP1Q14186 410 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 ZNF174Q15697 407 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 EP400NLQ6ZTU2 488 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 CATSPER3Q86XQ3 398 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 RNF149Q8NC42 400 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 HELQQ8TDG4 1101 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 NACC1Q96RE7 527 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 CDCA3Q99618 268 aaPredicted RBP12.8□□□□□ -0.36
LRTM1-202ENST00000493075 NFKBIZQ9BYH8 718 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 TLE6Q9H808 572 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 MINDY3Q9H8M7 445 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 UPF2Q9HAU5 1272 aaKnown RBP12.8□□□□□ -0.36
LRTM1-202ENST00000493075 NGRNQ9NPE2 291 aaKnown RBP12.8□□□□□ -0.36
LRTM1-202ENST00000493075 SPG21Q9NZD8 308 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 HCSTQ9UBK5 93 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 DBR1Q9UK59 544 aaKnown RBP12.8□□□□□ -0.36
LRTM1-202ENST00000493075 KIF3AQ9Y496 699 aa12.8□□□□□ -0.36
LRTM1-202ENST00000493075 OFD1O75665 1012 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 EYA4O95677 639 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 RPA1P27694 616 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 GTF2F1P35269 517 aaKnown RBP eCLIP12.79□□□□□ -0.36
LRTM1-202ENST00000493075 TECP42680 631 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 ALDH7A1P49419 539 aaKnown RBP12.79□□□□□ -0.36
LRTM1-202ENST00000493075 ERVFC1P60507 584 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 DLX2Q07687 328 aaPredicted RBP12.79□□□□□ -0.36
LRTM1-202ENST00000493075 NCBP1Q09161 790 aaKnown RBP12.79□□□□□ -0.36
LRTM1-202ENST00000493075 GNL2Q13823 731 aaKnown RBP12.79□□□□□ -0.36
LRTM1-202ENST00000493075 TTC38Q5R3I4 469 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 GLB1LQ6UWU2 654 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 ADGRD2Q7Z7M1 963 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 GJD3Q8N144 294 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 C4orf32Q8N8J7 132 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 CNNM3Q8NE01 707 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 ERMNQ8TAM6 284 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 PIGOQ8TEQ8 1089 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 CCDC51Q96ER9 411 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 MSLNLQ96KJ4 702 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 C1QTNF1Q9BXJ1 281 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 NOL7Q9UMY1 257 aaKnown RBP12.79□□□□□ -0.36
LRTM1-202ENST00000493075 PCDHB2Q9Y5E7 798 aa12.79□□□□□ -0.36
LRTM1-202ENST00000493075 EVPLQ92817 2033 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 MUC3AQ02505 3323 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 POTEMA6NI47 508 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 LINC01565O15544 149 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 MBTPS2O43462 519 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 NRIP1P48552 1158 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 MCM2P49736 904 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.36
LRTM1-202ENST00000493075 BCAR1P56945 870 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 COASYQ13057 564 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 PDIA5Q14554 519 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 SMAD2Q15796 467 aaKnown RBP12.78□□□□□ -0.36
LRTM1-202ENST00000493075 NOMO2Q5JPE7 1267 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 TMEM184AQ6ZMB5 413 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 SLC39A11Q8N1S5 342 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 CCDC43Q96MW1 224 aaKnown RBP12.78□□□□□ -0.36
LRTM1-202ENST00000493075 CD320Q9NPF0 282 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 UBN1Q9NPG3 1134 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
LRTM1-202ENST00000493075 CLEC1BQ9P126 229 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 CD207Q9UJ71 328 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 STK24Q9Y6E0 443 aa12.78□□□□□ -0.36
LRTM1-202ENST00000493075 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 PI4K2BG5E9Z4 385 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 TBX10O75333 385 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 MED24O75448 989 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 ERLIN2O94905 339 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 CSPG5O95196 566 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 NCLP19338 710 aaKnown RBP12.77□□□□□ -0.37
LRTM1-202ENST00000493075 GLRA2P23416 452 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 NDUFV1P49821 464 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 SMAD4Q13485 552 aaKnown RBP12.77□□□□□ -0.37
LRTM1-202ENST00000493075 DUSP6Q16828 381 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 UBXN11Q5T124 520 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 AGMOQ6ZNB7 445 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 RBM23Q86U06 439 aaKnown RBP12.77□□□□□ -0.37
LRTM1-202ENST00000493075 ADHFE1Q8IWW8 467 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 MCPH1Q8NEM0 835 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 LPPQ93052 612 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms