RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 EMC2Q15006 297 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 LY6KQ17RY6 165 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 ASTE1Q2TB18 679 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-216ENST00000492977 CELF3Q5SZQ8 465 aaKnown RBP15.32■□□□□ 0.04
PTPN7-216ENST00000492977 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 EHBP1Q8NDI1 1231 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 FAM167AQ96KS9 214 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 PCYT2Q99447 389 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 CBWD1Q9BRT8 395 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 TUBB2BQ9BVA1 445 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 TSGA10Q9BZW7 698 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 POLR3FQ9H1D9 316 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-216ENST00000492977 RRAGCQ9HB90 399 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 P4HA2O15460 535 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 TLR2O60603 784 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 N4BP1O75113 896 aaKnown RBP15.32■□□□□ 0.04
PTPN7-216ENST00000492977 ZBTB48P10074 688 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-216ENST00000492977 ACTN1P12814 892 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 VAV2P52735 878 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 RAPGEF1Q13905 1077 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 CCDC122Q5T0U0 273 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 ABRAQ8N0Z2 381 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 BRI3BPQ8WY22 251 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 JAKMIP2Q96AA8 810 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 SPAG5Q96R06 1193 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 CEP89Q96ST8 783 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 PORCNQ9H237 461 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 PCIF1Q9H4Z3 704 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 AZI2Q9H6S1 392 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 EFCC1Q9HA90 598 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 SIX2Q9NPC8 291 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 ARHGAP28Q9P2N2 729 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 MORF4L1Q9UBU8 362 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 GUCA1BQ9UMX6 200 aa15.32■□□□□ 0.04
PTPN7-216ENST00000492977 BZW2Q9Y6E2 419 aaKnown RBP15.32■□□□□ 0.04
PTPN7-216ENST00000492977 CTAGE9A4FU28 777 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 RBAK-RBAKDNI3L0D1 243 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 ZNF263O14978 683 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 STRNO43815 780 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 LGR5O75473 907 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 CELF2O95319 508 aaKnown RBP15.31■□□□□ 0.04
PTPN7-216ENST00000492977 ABL1P00519 1130 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 CNGA1P29973 690 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 TCF7P36402 384 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-216ENST00000492977 VAMP7P51809 220 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 SOX10P56693 466 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 APBA1Q02410 837 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 TARBP2Q15633 366 aaKnown RBP15.31■□□□□ 0.04
PTPN7-216ENST00000492977 ASIC2Q16515 512 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 BRDTQ58F21 947 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-216ENST00000492977 SPRYD7Q5W111 196 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 CCDC62Q6P9F0 684 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 RDH13Q8NBN7 331 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 SLC7A3Q8WY07 619 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 IFIH1Q9BYX4 1025 aaKnown RBP15.31■□□□□ 0.04
PTPN7-216ENST00000492977 ZNF215Q9UL58 517 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-216ENST00000492977 PCDHA13Q9Y5I0 950 aa15.31■□□□□ 0.04
PTPN7-216ENST00000492977 TISP43B9A030 160 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 PMM2O15305 246 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 ARIH2O95376 493 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 ADSSP30520 456 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 ARL2P36404 184 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 CYP27A1Q02318 531 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 KLHL30Q0D2K2 578 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 CETN1Q12798 172 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 KIF5AQ12840 1032 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 TTLL4Q14679 1199 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 ZNF792Q3KQV3 632 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 TDRD12Q587J7 1177 aaKnown RBP15.3■□□□□ 0.04
PTPN7-216ENST00000492977 PLPPR4Q7Z2D5 763 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 FMNL3Q8IVF7 1028 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 DHX37Q8IY37 1157 aaKnown RBP15.3■□□□□ 0.04
PTPN7-216ENST00000492977 EXOC8Q8IYI6 725 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 SLC35F6Q8N357 371 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 ANKRD13CQ8N6S4 541 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 GPR20Q99678 358 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 KIFC3Q9BVG8 833 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 FHOD1Q9Y613 1164 aa15.3■□□□□ 0.04
PTPN7-216ENST00000492977 ANKRD63C9JTQ0 380 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
PTPN7-216ENST00000492977 TRIM49P0CI25 452 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 TRIM49CP0CI26 452 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 GARTP22102 1010 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 ANXA13P27216 316 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 NAMPTP43490 491 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 JAM2P57087 298 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 MYL7Q01449 175 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 ENPEPQ07075 957 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 CBWD6Q4V339 395 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 CBWD3Q5JTY5 395 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 CBWD5Q5RIA9 395 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 IRF2BP2Q7Z5L9 587 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 FBXO16Q8IX29 292 aaPredicted RBP15.29■□□□□ 0.04
PTPN7-216ENST00000492977 SCFD2Q8WU76 684 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 NAPGQ99747 312 aaPredicted RBP15.29■□□□□ 0.04
PTPN7-216ENST00000492977 LACRTQ9GZZ8 138 aa15.29■□□□□ 0.04
PTPN7-216ENST00000492977 LUC7LQ9NQ29 371 aaKnown RBP15.29■□□□□ 0.04
PTPN7-216ENST00000492977 DIS3Q9Y2L1 958 aaKnown RBP15.29■□□□□ 0.04
PTPN7-216ENST00000492977 MRFAP1Q9Y605 127 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms