RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 TPH2Q8IWU9 490 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 SLC39A11Q8N1S5 342 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 TMEM87AQ8NBN3 555 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 URGCPQ8TCY9 931 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 PHF7Q9BWX1 381 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-205ENST00000492851 IFT122Q9HBG6 1241 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 ANKEF1Q9NU02 776 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 AGPAT5Q9NUQ2 364 aa13.91□□□□□ -0.18
COL6A1-205ENST00000492851 BARX2Q9UMQ3 279 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-205ENST00000492851 SLITRK3O94933 977 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 LYPLA2O95372 231 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 GLP2RO95838 553 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 SRGAP2CP0DJJ0 459 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 AXLP30530 894 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 RNASELQ05823 741 aaKnown RBP13.9□□□□□ -0.18
COL6A1-205ENST00000492851 LAMTOR4Q0VGL1 99 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 NR5A1Q13285 461 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 KCNC3Q14003 757 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 TFDP1Q14186 410 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 CALCRLQ16602 461 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 NOMO2Q5JPE7 1267 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 RNF135Q8IUD6 432 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 KSR1Q8IVT5 923 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 NECAB1Q8N987 351 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 CASP10Q92851 521 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 TNFRSF25Q93038 417 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 DYDC2Q96IM9 177 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 MFSD14AQ96MC6 490 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 MTRQ99707 1265 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 HSD17B14Q9BPX1 270 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 KCNH6Q9H252 994 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 TTC12Q9H892 705 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-205ENST00000492851 GJB4Q9NTQ9 266 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 RGL1Q9NZL6 768 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-205ENST00000492851 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-205ENST00000492851 PCDHB2Q9Y5E7 798 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 EVPLQ92817 2033 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
COL6A1-205ENST00000492851 CNTNAP2Q9UHC6 1331 aa13.9□□□□□ -0.19
COL6A1-205ENST00000492851 FAM86C2PA6NEL3 165 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 BTBD18B2RXH4 712 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 LOC730098B7Z3J9 87 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 NEMFO60524 1076 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 OFD1O75665 1012 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 DGAT1O75907 488 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 ALDH2P05091 517 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 TECP42680 631 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 SPIRE1Q08AE8 756 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 CBX2Q14781 532 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-205ENST00000492851 EMC2Q15006 297 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 CES5AQ6NT32 575 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 ANKRD54Q6NXT1 300 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 MRPL10Q7Z7H8 261 aaKnown RBP13.89□□□□□ -0.19
COL6A1-205ENST00000492851 DDX53Q86TM3 631 aaKnown RBP13.89□□□□□ -0.19
COL6A1-205ENST00000492851 FERMT3Q86UX7 667 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 DIS3L2Q8IYB7 885 aaKnown RBP13.89□□□□□ -0.19
COL6A1-205ENST00000492851 RNF149Q8NC42 400 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 NSUN7Q8NE18 718 aaKnown RBP13.89□□□□□ -0.19
COL6A1-205ENST00000492851 EDAQ92838 391 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 TMEM143Q96AN5 459 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 CCDC51Q96ER9 411 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 CCDC43Q96MW1 224 aaKnown RBP13.89□□□□□ -0.19
COL6A1-205ENST00000492851 NECTIN4Q96NY8 510 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 FAM193BQ96PV7 902 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-205ENST00000492851 EIF2AK1Q9BQI3 630 aaKnown RBP13.89□□□□□ -0.19
COL6A1-205ENST00000492851 HCSTQ9UBK5 93 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 RAPGEFL1Q9UHV5 662 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 PCDHGC5Q9Y5F6 944 aa13.89□□□□□ -0.19
COL6A1-205ENST00000492851 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-205ENST00000492851 HIDE1A8MVS5 230 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 ZC3H11AO75152 810 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL6A1-205ENST00000492851 ERLIN2O94905 339 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 CXCL14O95715 111 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 CYP4A11Q02928 519 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 ITIH3Q06033 890 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 ORC2Q13416 577 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-205ENST00000492851 CTTNQ14247 550 aaKnown RBP13.88□□□□□ -0.19
COL6A1-205ENST00000492851 EARS2Q5JPH6 523 aaKnown RBP13.88□□□□□ -0.19
COL6A1-205ENST00000492851 HACE1Q8IYU2 909 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
COL6A1-205ENST00000492851 SUSD6Q92537 303 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 IGSF21Q96ID5 467 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 LLPHQ9BRT6 129 aaKnown RBP13.88□□□□□ -0.19
COL6A1-205ENST00000492851 TBC1D13Q9NVG8 400 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 WRAP73Q9P2S5 460 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-205ENST00000492851 LIMCH1Q9UPQ0 1083 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 IRAK3Q9Y616 596 aa13.88□□□□□ -0.19
COL6A1-205ENST00000492851 C2orf71A6NGG8 1288 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 NR1I2O75469 434 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 GALTP07902 379 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 CTSAP10619 480 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 PBX3P40426 434 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 TXKP42681 527 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 PTENP60484 403 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 NOTUMQ6P988 496 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 PPFIBP1Q86W92 1011 aa13.87□□□□□ -0.19
COL6A1-205ENST00000492851 VPS52Q8N1B4 723 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms