RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 VASPP50552 380 aaPredicted RBP6.21□□□□□ -1.42
SEC13-219ENST00000492602 HSD17B4P51659 736 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 AK2P54819 239 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 SIM1P81133 766 aaPredicted RBP6.21□□□□□ -1.42
SEC13-219ENST00000492602 KCNC4Q03721 635 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 PLCB4Q15147 1175 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 STOX1Q6ZVD7 989 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 FAM228AQ86W67 206 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 ECHDC2Q86YB7 292 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 ZNF687Q8N1G0 1237 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 SPEM1Q8N4L4 309 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 MDM1Q8TC05 714 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 TRAPPC12Q8WVT3 735 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 FAM3CQ92520 227 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 FGF13Q92913 245 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 PPP1R16BQ96T49 567 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 VN1R3Q9BXE9 311 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 PRKD2Q9BZL6 878 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 RNF39Q9H2S5 420 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 SLC32A1Q9H598 525 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 TMEM9BQ9NQ34 198 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 JADE2Q9NQC1 790 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 RTEL1Q9NZ71 1219 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 PIEZO2Q9H5I5 2752 aa6.21□□□□□ -1.42
SEC13-219ENST00000492602 LNP1A1A4G5 178 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 H0Y626 953 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 PYCARD-AS1I3L0S3 204 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 ATXN7O15265 892 aaPredicted RBP6.2□□□□□ -1.42
SEC13-219ENST00000492602 TEX28O15482 410 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 FIBPO43427 364 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 DHX16O60231 1041 aaKnown RBP6.2□□□□□ -1.42
SEC13-219ENST00000492602 TRIM16O95361 564 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 GALTP07902 379 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 CT47B1P0C2W7 299 aaPredicted RBP6.2□□□□□ -1.42
SEC13-219ENST00000492602 NTHL1P78549 312 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 CREB5Q02930 508 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 CTDSPL2Q05D32 466 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 SEMA3FQ13275 785 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 DSC3Q14574 896 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 QRICH1Q2TAL8 776 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 RRP12Q5JTH9 1297 aaKnown RBP6.2□□□□□ -1.42
SEC13-219ENST00000492602 GRASPQ7Z6J2 395 aaPredicted RBP6.2□□□□□ -1.42
SEC13-219ENST00000492602 WDR5BQ86VZ2 330 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 FCHSD1Q86WN1 690 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 PALB2Q86YC2 1186 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 CLASRPQ8N2M8 674 aaKnown RBP6.2□□□□□ -1.42
SEC13-219ENST00000492602 SPATA18Q8TC71 538 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 GAB3Q8WWW8 586 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 SEPT1Q8WYJ6 367 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 OSBP2Q969R2 916 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 OSMRQ99650 979 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 NACAP1Q9BZK3 213 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 NAPBQ9H115 298 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 SMARCAD1Q9H4L7 1026 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 VAT1LQ9HCJ6 419 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 TCP11L1Q9NUJ3 509 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 PTPN13Q12923 2485 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 KALRNO60229 2985 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 ACACAQ13085 2346 aa6.2□□□□□ -1.42
SEC13-219ENST00000492602 GSTTP1A0A1W2PQM5 241 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 CARNS1A5YM72 827 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 CDX4O14627 284 aaPredicted RBP6.19□□□□□ -1.42
SEC13-219ENST00000492602 OPLAHO14841 1288 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 GAS2O43903 313 aaKnown RBP6.19□□□□□ -1.42
SEC13-219ENST00000492602 PAPSS2O95340 614 aaPredicted RBP6.19□□□□□ -1.42
SEC13-219ENST00000492602 CAVIN2O95810 425 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 URODP06132 367 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 SNHG28P0DPA3 235 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 CHRNB1P11230 501 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 TRIM27P14373 513 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 PXNP49023 591 aaPredicted RBP6.19□□□□□ -1.42
SEC13-219ENST00000492602 MRPS9P82933 396 aaKnown RBP6.19□□□□□ -1.42
SEC13-219ENST00000492602 KIZQ2M2Z5 673 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 GPATCH4Q5T3I0 446 aaKnown RBP6.19□□□□□ -1.42
SEC13-219ENST00000492602 MTHFD1LQ6UB35 978 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 ADGRF4Q8IZF3 695 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 RHPN1Q8TCX5 695 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 ARHGAP45Q92619 1136 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 APPBP2Q92624 585 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 TNPO1Q92973 898 aaKnown RBP6.19□□□□□ -1.42
SEC13-219ENST00000492602 INPP4AQ96PE3 977 aaPredicted RBP6.19□□□□□ -1.42
SEC13-219ENST00000492602 RPS6KC1Q96S38 1066 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 PLA2G2FQ9BZM2 168 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 GBP3Q9H0R5 595 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 PLEKHA4Q9H4M7 779 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 NRDE2Q9H7Z3 1164 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 TOMM22Q9NS69 142 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 C2orf42Q9NWW7 574 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 ZDHHC7Q9NXF8 308 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 DNAJB4Q9UDY4 337 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 STK39Q9UEW8 545 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.19□□□□□ -1.42
SEC13-219ENST00000492602 F5P12259 2224 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 LAMA1P25391 3075 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 APC2O95996 2303 aa6.19□□□□□ -1.42
SEC13-219ENST00000492602 URB1O60287 2271 aaKnown RBP6.18□□□□□ -1.42
SEC13-219ENST00000492602 M0R2C6 588 aa6.18□□□□□ -1.42
SEC13-219ENST00000492602 CAPN9O14815 690 aa6.18□□□□□ -1.42
SEC13-219ENST00000492602 KHNYNO15037 678 aaKnown RBP6.18□□□□□ -1.42
SEC13-219ENST00000492602 TGM5O43548 720 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms