RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 ERLIN2O94905 339 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 EYA4O95677 639 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 ATF7P17544 494 aaPredicted RBP17.69■□□□□ 0.42
PKP4-214ENST00000492496 HYIQ5T013 277 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 ABI1Q8IZP0 508 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 AK8Q96MA6 479 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 CASD1Q96PB1 797 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 MMTAG2Q9BU76 263 aaKnown RBP17.69■□□□□ 0.42
PKP4-214ENST00000492496 BHMT2Q9H2M3 363 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 AAASQ9NRG9 546 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 FAM105AQ9NUU6 356 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 DNM3Q9UQ16 869 aa17.69■□□□□ 0.42
PKP4-214ENST00000492496 MYH11P35749 1972 aa17.68■□□□□ 0.42
PKP4-214ENST00000492496 VWA3AA6NCI4 1184 aa17.68■□□□□ 0.42
PKP4-214ENST00000492496 SLC26A4O43511 780 aa17.68■□□□□ 0.42
PKP4-214ENST00000492496 CDC25AP30304 524 aa17.68■□□□□ 0.42
PKP4-214ENST00000492496 HOXA11P31270 313 aaPredicted RBP17.68■□□□□ 0.42
PKP4-214ENST00000492496 NCBP1Q09161 790 aaKnown RBP17.68■□□□□ 0.42
PKP4-214ENST00000492496 RESTQ13127 1097 aa17.68■□□□□ 0.42
PKP4-214ENST00000492496 MAEAQ7L5Y9 396 aa17.68■□□□□ 0.42
PKP4-214ENST00000492496 NT5C3AQ9H0P0 336 aa17.68■□□□□ 0.42
PKP4-214ENST00000492496 GPRC5CQ9NQ84 441 aa17.68■□□□□ 0.42
PKP4-214ENST00000492496 INO80B-WBP1J3KQ70 363 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 MBTD1Q05BQ5 628 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 SF3A1Q15459 793 aaKnown RBP17.67■□□□□ 0.42
PKP4-214ENST00000492496 CSPP1Q1MSJ5 1256 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 TIGD5Q53EQ6 642 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 CLLU1OSQ5K130 101 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 SPOUT1Q5T280 376 aaKnown RBP17.67■□□□□ 0.42
PKP4-214ENST00000492496 LRRC43Q8N309 656 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 RNF169Q8NCN4 708 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 PGBD4Q96DM1 585 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 CCDC51Q96ER9 411 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 ZSCAN16Q9H4T2 348 aaPredicted RBP17.67■□□□□ 0.42
PKP4-214ENST00000492496 CWH43Q9H720 699 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 TYW1Q9NV66 732 aaKnown RBP17.67■□□□□ 0.42
PKP4-214ENST00000492496 THEGQ9P2T0 379 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 PLAGL2Q9UPG8 496 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 MTMR6Q9Y217 621 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 PCDHB12Q9Y5F1 795 aa17.67■□□□□ 0.42
PKP4-214ENST00000492496 LRRIQ4A6NIV6 560 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 E9PMD0 336 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 GRM6O15303 877 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 STX6O43752 255 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 TSPAN1O60635 241 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 PDIA4P13667 645 aaKnown RBP17.66■□□□□ 0.42
PKP4-214ENST00000492496 LAG3P18627 525 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 NAMPTP43490 491 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 PPP2R5AQ15172 486 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 SKIV2LQ15477 1246 aaKnown RBP17.66■□□□□ 0.42
PKP4-214ENST00000492496 AMHR2Q16671 573 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 CDCA2Q69YH5 1023 aaPredicted RBP17.66■□□□□ 0.42
PKP4-214ENST00000492496 NOTUMQ6P988 496 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 MRPL10Q7Z7H8 261 aaKnown RBP17.66■□□□□ 0.42
PKP4-214ENST00000492496 KLHL23Q8NBE8 558 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 COLGALT1Q8NBJ5 622 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 CNNM3Q8NE01 707 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 ATXN2LQ8WWM7 1075 aaKnown RBP17.66■□□□□ 0.42
PKP4-214ENST00000492496 KIFAP3Q92845 792 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 MRPL9Q9BYD2 267 aaKnown RBP17.66■□□□□ 0.42
PKP4-214ENST00000492496 C2orf40Q9H1Z8 148 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 PRDM6Q9NQX0 595 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 COG5Q9UP83 839 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 PCDHB2Q9Y5E7 798 aa17.66■□□□□ 0.42
PKP4-214ENST00000492496 ITGB1P05556 798 aa17.65■□□□□ 0.42
PKP4-214ENST00000492496 LONP1P36776 959 aaKnown RBP17.65■□□□□ 0.42
PKP4-214ENST00000492496 FAM187BQ17R55 369 aa17.65■□□□□ 0.42
PKP4-214ENST00000492496 UBXN11Q5T124 520 aa17.65■□□□□ 0.42
PKP4-214ENST00000492496 LRRC55Q6ZSA7 311 aa17.65■□□□□ 0.42
PKP4-214ENST00000492496 ZBTB8OSQ8IWT0 167 aa17.65■□□□□ 0.42
PKP4-214ENST00000492496 HELQQ8TDG4 1101 aa17.65■□□□□ 0.42
PKP4-214ENST00000492496 CDK5RAP3Q96JB5 506 aa17.65■□□□□ 0.42
PKP4-214ENST00000492496 PRIMPOLQ96LW4 560 aa17.65■□□□□ 0.42
PKP4-214ENST00000492496 PRMT7Q9NVM4 692 aaPredicted RBP17.65■□□□□ 0.42
PKP4-214ENST00000492496 TRANK1O15050 2925 aa17.65■□□□□ 0.42
PKP4-214ENST00000492496 UBE3AQ05086 875 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 GLB1LQ6UWU2 654 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 KCNK18Q7Z418 384 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 CABP7Q86V35 215 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 SPPL3Q8TCT6 385 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 BSNDQ8WZ55 320 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 IFT74Q96LB3 600 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 PNMA5Q96PV4 448 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 TIPINQ9BVW5 301 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 CSRNP2Q9H175 543 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 FZD8Q9H461 694 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 NSUN3Q9H649 340 aaKnown RBP17.64■□□□□ 0.41
PKP4-214ENST00000492496 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
PKP4-214ENST00000492496 CNTNAP2Q9UHC6 1331 aa17.64■□□□□ 0.41
PKP4-214ENST00000492496 TDRD15B5MCY1 1934 aaKnown RBP17.63■□□□□ 0.41
PKP4-214ENST00000492496 CARNS1A5YM72 827 aa17.63■□□□□ 0.41
PKP4-214ENST00000492496 HSP90AA1P07900 732 aaKnown RBP17.63■□□□□ 0.41
PKP4-214ENST00000492496 ARF4P18085 180 aaPredicted RBP17.63■□□□□ 0.41
PKP4-214ENST00000492496 NCLP19338 710 aaKnown RBP17.63■□□□□ 0.41
PKP4-214ENST00000492496 UBA7P41226 1012 aa17.63■□□□□ 0.41
PKP4-214ENST00000492496 MRPS5P82675 430 aaKnown RBP17.63■□□□□ 0.41
PKP4-214ENST00000492496 PTPAQ15257 358 aa17.63■□□□□ 0.41
PKP4-214ENST00000492496 ZRSR1Q15695 479 aaKnown RBP17.63■□□□□ 0.41
PKP4-214ENST00000492496 TMEM119Q4V9L6 283 aa17.63■□□□□ 0.41
PKP4-214ENST00000492496 RINT1Q6NUQ1 792 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms