RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 ARPC5LQ9BPX5 153 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 TRIM51Q9BSJ1 452 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 BHMT2Q9H2M3 363 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 DNAJB4Q9UDY4 337 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 PARP2Q9UGN5 583 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 KIAA0391O15091 583 aaKnown RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 CIAO1O76071 339 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 RARGP13631 454 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ETS2P15036 469 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ADCY1Q08828 1119 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 CLUL1Q15846 466 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ACSBG2Q5FVE4 666 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 AKAP4Q5JQC9 854 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 CENPPQ6IPU0 288 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ACAD11Q709F0 780 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 RIBC1Q8N443 379 aaPredicted RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 ESR2Q92731 530 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 DGCR14Q96DF8 476 aaKnown RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 CNNM2Q9H8M5 875 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 EFR3BQ9Y2G0 817 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 A0A0A6YYK5 440 aaPredicted RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 KANSL1LA0AUZ9 987 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 HTR3EA5X5Y0 456 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 TRIM43BA6NCK2 446 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 A8MXQ7 604 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 NKRFO15226 690 aaKnown RBP eCLIP10.41□□□□□ -0.74
VPS8-225ENST00000492449 SERPINB3P29508 390 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 HOXA7P31268 230 aaPredicted RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 NPEPPSP55786 919 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 SESN3P58005 492 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 RPL26P61254 145 aaKnown RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 DR1Q01658 176 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 KIAA1755Q5JYT7 1200 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ARHGEF18Q6ZSZ5 1173 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 MAP7D3Q8IWC1 876 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.41□□□□□ -0.74
VPS8-225ENST00000492449 HES6Q96HZ4 224 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ABHD8Q96I13 439 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 DHRS1Q96LJ7 313 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 CRAMP1Q96RY5 1269 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ZDHHC7Q9NXF8 308 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 GRHL1Q9NZI5 618 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ZSWIM5Q9P217 1185 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 NR2E3Q9Y5X4 410 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 A6NJR5 290 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 AP1G1O43747 822 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 KRT36O76013 467 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 FGFR1OPO95684 399 aaKnown RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 ZCCHC18P0CG32 403 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 FUT4P22083 530 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 HDAC4P56524 1084 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 DSG1Q02413 1049 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 STRN3Q13033 797 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 NPY5RQ15761 445 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 CERKLQ49MI3 558 aaPredicted RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 OLFML2BQ68BL8 750 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 OLFML1Q6UWY5 402 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 B3GNT6Q6ZMB0 384 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 CCDC65Q8IXS2 484 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 GAB3Q8WWW8 586 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ARHGEF2Q92974 986 aaKnown RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 MIPEPQ99797 713 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 DDX50Q9BQ39 737 aaKnown RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 TUBB6Q9BUF5 446 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 PITPNM3Q9BZ71 974 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 SEMA4AQ9H3S1 761 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 KIAA1522Q9P206 1035 aaPredicted RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 DBR1Q9UK59 544 aaKnown RBP10.41□□□□□ -0.74
VPS8-225ENST00000492449 ANGPTL2Q9UKU9 493 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 ACTL7BQ9Y614 415 aa10.41□□□□□ -0.74
VPS8-225ENST00000492449 A0A087X0T9 212 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 FAM228BP0C875 321 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 CDK4P11802 303 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 MTTPP55157 894 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 CDR2Q01850 454 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 SH3D19Q5HYK7 790 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 CFAP157Q5JU67 520 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 RFWD3Q6PCD5 774 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 PPP1R21Q6ZMI0 780 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 SRBD1Q8N5C6 995 aaKnown RBP10.4□□□□□ -0.74
VPS8-225ENST00000492449 PDCD7Q8N8D1 485 aaKnown RBP10.4□□□□□ -0.74
VPS8-225ENST00000492449 C4orf32Q8N8J7 132 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 TPCN2Q8NHX9 752 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 MYD88Q99836 296 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 PACSIN1Q9BY11 444 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 CADM1Q9BY67 442 aaKnown RBP10.4□□□□□ -0.74
VPS8-225ENST00000492449 NLRP2Q9NX02 1062 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 BTBD7Q9P203 1132 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 SPATA31A3Q5VYP0 1347 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 ADGRA3Q8IWK6 1321 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 MYH3P11055 1940 aa10.4□□□□□ -0.74
VPS8-225ENST00000492449 PLSCR1O15162 318 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 TCEA3O75764 348 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 NOL4O94818 638 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 CLCN2P51788 898 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 GEMIN4P57678 1058 aaKnown RBP10.4□□□□□ -0.75
VPS8-225ENST00000492449 PDE1BQ01064 536 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 DCTN2Q13561 401 aaKnown RBP10.4□□□□□ -0.75
VPS8-225ENST00000492449 CTC1Q2NKJ3 1217 aa10.4□□□□□ -0.75
VPS8-225ENST00000492449 SLC45A4Q5BKX6 768 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms