RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 HELQQ8TDG4 1101 aa10.24□□□□□ -0.77
HDAC3-212ENST00000492407 SLC7A3Q8WY07 619 aa10.24□□□□□ -0.77
HDAC3-212ENST00000492407 RPGRIP1Q96KN7 1286 aa10.24□□□□□ -0.77
HDAC3-212ENST00000492407 NCOA5Q9HCD5 579 aaKnown RBP10.24□□□□□ -0.77
HDAC3-212ENST00000492407 UBN1Q9NPG3 1134 aa10.24□□□□□ -0.77
HDAC3-212ENST00000492407 KANSL3Q9P2N6 904 aa10.24□□□□□ -0.77
HDAC3-212ENST00000492407 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-212ENST00000492407 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
HDAC3-212ENST00000492407 MUC6Q6W4X9 2439 aa10.24□□□□□ -0.77
HDAC3-212ENST00000492407 MYO7AQ13402 2215 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 A0A087WZ62 844 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 CLASP2O75122 1294 aaKnown RBP10.23□□□□□ -0.77
HDAC3-212ENST00000492407 TDP2O95551 362 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 CXCL14O95715 111 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 C1RP00736 705 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 PTMSP20962 102 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 MRE11P49959 708 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 NPY5RQ15761 445 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 NOMO2Q5JPE7 1267 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 TWF2Q6IBS0 349 aaKnown RBP10.23□□□□□ -0.77
HDAC3-212ENST00000492407 ANO5Q75V66 913 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 OTUD6AQ7L8S5 288 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 MRPL10Q7Z7H8 261 aaKnown RBP10.23□□□□□ -0.77
HDAC3-212ENST00000492407 NEK8Q86SG6 692 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 C4orf19Q8IY42 314 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 PLCD3Q8N3E9 789 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 RNF169Q8NCN4 708 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 CNNM3Q8NE01 707 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 ASIC4Q96FT7 647 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 IGSF21Q96ID5 467 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 RIPOR3Q96MK2 946 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 FDXACB1Q9BRP7 624 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-212ENST00000492407 PHF20Q9BVI0 1012 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 KCNMB3Q9NPA1 279 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 CYP26B1Q9NR63 512 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 FAM105AQ9NUU6 356 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 HCSTQ9UBK5 93 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 USTQ9Y2C2 406 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 HCFC2Q9Y5Z7 792 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 STK36Q9NRP7 1315 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 CNTNAP2Q9UHC6 1331 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 FNDC1Q4ZHG4 1894 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-212ENST00000492407 ATG2AQ2TAZ0 1938 aa10.23□□□□□ -0.77
HDAC3-212ENST00000492407 KIAA1671Q9BY89 1806 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 CCDC194A0A1B0GVG4 234 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 OFD1O75665 1012 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 GALTP07902 379 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 CTSAP10619 480 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 POU5F1BQ06416 359 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 DRP2Q13474 957 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 EPHA7Q15375 998 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 ATAT1Q5SQI0 421 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 CATSPER4Q7RTX7 472 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 RHPN2Q8IUC4 686 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 SLFN12Q8IYM2 578 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 ZDHHC14Q8IZN3 488 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 VPS52Q8N1B4 723 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 TMEM87AQ8NBN3 555 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 TCP11Q8WWU5 503 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 WASF1Q92558 559 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 CCDC51Q96ER9 411 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 TMEM175Q9BSA9 504 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 ZBP1Q9H171 429 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 DHX33Q9H6R0 707 aaKnown RBP10.22□□□□□ -0.77
HDAC3-212ENST00000492407 IFT122Q9HBG6 1241 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 PDRG1Q9NUG6 133 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 AGPAT5Q9NUQ2 364 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 VAV3Q9UKW4 847 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 PIN4Q9Y237 131 aaKnown RBP10.22□□□□□ -0.77
HDAC3-212ENST00000492407 SSX2IPQ9Y2D8 614 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 COL4A3BPQ9Y5P4 624 aa10.22□□□□□ -0.77
HDAC3-212ENST00000492407 INPPL1O15357 1258 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 BAG4O95429 457 aaKnown RBP10.21□□□□□ -0.77
HDAC3-212ENST00000492407 ALDH2P05091 517 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 FGFR4P22455 802 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 AXLP30530 894 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 MTMR3Q13615 1198 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 MXD4Q14582 209 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-212ENST00000492407 ANKRD1Q15327 319 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 INF2Q27J81 1249 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 LETM2Q2VYF4 491 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 KIAA1841Q6NSI8 718 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 LLGL2Q6P1M3 1020 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 CYP26C1Q6V0L0 522 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 URGCPQ8TCY9 931 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 SLC22A17Q8WUG5 538 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 PSPC1Q8WXF1 523 aaKnown RBP10.21□□□□□ -0.77
HDAC3-212ENST00000492407 ZNF592Q92610 1267 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 CEP170P1Q96L14 293 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 EMILIN2Q9BXX0 1053 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 RHOBTB2Q9BYZ6 727 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 ZSWIM4Q9H7M6 989 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 NRDE2Q9H7Z3 1164 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 TBC1D13Q9NVG8 400 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 DPP7Q9UHL4 492 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 SORCS3Q9UPU3 1222 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 PCDHB2Q9Y5E7 798 aa10.21□□□□□ -0.77
HDAC3-212ENST00000492407 PLXNA4Q9HCM2 1894 aa10.21□□□□□ -0.78
HDAC3-212ENST00000492407 TRIOO75962 3097 aa10.2□□□□□ -0.78
HDAC3-212ENST00000492407 EML1O00423 815 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms