RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PER2O15055 1255 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 ZBTB39O15060 712 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 ASAP2O43150 1006 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 DTNBO60941 627 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 EFEMP2O95967 443 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 XRCC6P12956 609 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 KRT2P35908 639 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 NDUFV1P49821 464 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 RAB27AP51159 221 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 NEK4P51957 841 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 RBM10P98175 930 aaKnown RBP9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 KRT17Q04695 432 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 LAMTOR4Q0VGL1 99 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 CLUL1Q15846 466 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 UBXN11Q5T124 520 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 SYCE2Q6PIF2 218 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 EP400NLQ6ZTU2 488 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 OTUD6AQ7L8S5 288 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 RBM23Q86U06 439 aaKnown RBP9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 RHPN2Q8IUC4 686 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 RNF135Q8IUD6 432 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 HELQQ8TDG4 1101 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 SLC7A3Q8WY07 619 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 CEP170P1Q96L14 293 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 LXNQ9BS40 222 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 NFKBIZQ9BYH8 718 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 MINDY3Q9H8M7 445 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 XPNPEP1Q9NQW7 623 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 FAM105AQ9NUU6 356 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 BARX2Q9UMQ3 279 aaPredicted RBP9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 PCDHA12Q9UN75 941 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 USP15Q9Y4E8 981 aaPredicted RBP9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 COL4A3BPQ9Y5P4 624 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 ZDBF2Q9HCK1 2354 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 MEIS3P2A8K0S8 358 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 JAK2O60674 1132 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 BAG4O95429 457 aaKnown RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 HOXB8P17481 243 aaPredicted RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 ARL2P36404 184 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 ALDH7A1P49419 539 aaKnown RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 POLGP54098 1239 aaPredicted RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 BCAR1P56945 870 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 PTENP60484 403 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 MXD4Q14582 209 aaPredicted RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 NOMO2Q5JPE7 1267 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 SPOUT1Q5T280 376 aaKnown RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 ANKRD54Q6NXT1 300 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 AGMOQ6ZNB7 445 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 DDX53Q86TM3 631 aaKnown RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 ABI1Q8IZP0 508 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 MICAL1Q8TDZ2 1067 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 TCP11Q8WWU5 503 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 PSPC1Q8WXF1 523 aaKnown RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 TMEM143Q96AN5 459 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 IGSF21Q96ID5 467 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 DYDC2Q96IM9 177 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 SCLT1Q96NL6 688 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 KIF2CQ99661 725 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 TCF25Q9BQ70 676 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 EIF2AK1Q9BQI3 630 aaKnown RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 PHF7Q9BWX1 381 aaPredicted RBP9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 NRDE2Q9H7Z3 1164 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 ANKEF1Q9NU02 776 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 TBC1D13Q9NVG8 400 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
SMARCB1-207ENST00000491967 FAM86C2PA6NEL3 165 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 B4GALT3O60512 393 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 LILRB3O75022 631 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 GALTP07902 379 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 SPATA31C1P0DKV0 1188 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 NCLP19338 710 aaKnown RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 AXLP30530 894 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 PBX3P40426 434 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 CTTNQ14247 550 aaKnown RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 SMC1AQ14683 1233 aaKnown RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 EMC2Q15006 297 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 AMHR2Q16671 573 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 TWF2Q6IBS0 349 aaKnown RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 GLB1LQ6UWU2 654 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 CATSPER4Q7RTX7 472 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 BMP8AQ7Z5Y6 402 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 TMEM173Q86WV6 379 aaPredicted RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 DIS3L2Q8IYB7 885 aaKnown RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 SMG8Q8ND04 991 aaKnown RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 BCL7CQ8WUZ0 217 aaPredicted RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 EDAQ92838 391 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 LPPQ93052 612 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 NLRP4Q96MN2 994 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 LLPHQ9BRT6 129 aaKnown RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 VN1R3Q9BXE9 311 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 KCNH6Q9H252 994 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 TTC12Q9H892 705 aaPredicted RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 BRMS1Q9HCU9 246 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 PIN4Q9Y237 131 aaKnown RBP9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 CACNA1HO95180 2353 aa9.35□□□□□ -0.91
SMARCB1-207ENST00000491967 CLASP2O75122 1294 aaKnown RBP9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 DGAT1O75907 488 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 PAPLNO95428 1278 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 SRGAP2CP0DJJ0 459 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms