RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 DENND2DQ9H6A0 471 aaPredicted RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 METTL14Q9HCE5 456 aaKnown RBP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 KCNK9Q9NPC2 374 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 CCDC87Q9NVE4 849 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 GALNT8Q9NY28 637 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 NKIRAS1Q9NYS0 192 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 PCDH10Q9P2E7 1040 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 CIDEBQ9UHD4 219 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 HAO1Q9UJM8 370 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 NENFQ9UMX5 172 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 STARD13Q9Y3M8 1113 aa6.93□□□□□ -1.3
CCDC6-202ENST00000491922 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC6-202ENST00000491922 RGPD5Q99666 1765 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 PHF2O75151 1096 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 GCP02774 474 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 FGFR4P22455 802 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 EPHB2P29323 1055 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 EPS15P42566 896 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 SCNN1BP51168 640 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 RNASELQ05823 741 aaKnown RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 MCL1Q07820 350 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 ZCWPW2Q504Y3 356 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 RASIP1Q5U651 963 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 SNX30Q5VWJ9 437 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 TRIM59Q8IWR1 403 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 MYOCDQ8IZQ8 938 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 UHMK1Q8TAS1 419 aaKnown RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 GDAP1Q8TB36 358 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 SCG3Q8WXD2 468 aaKnown RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 SLC7A6OSQ96CW6 309 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 HAPLN3Q96S86 360 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 IWS1Q96ST2 819 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 CENPKQ9BS16 269 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 SPATA16Q9BXB7 569 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 KIAA1683Q9H0B3 1180 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 IL1RAPL1Q9NZN1 696 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 ARMCX3Q9UH62 379 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 MYMKA6NI61 221 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 TRAF5O00463 557 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 HGSO14964 777 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 DDX3YO15523 660 aaKnown RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 ENTPD5O75356 428 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 TTLL1O95922 423 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 CCDC166P0CW27 439 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 BRAFP15056 766 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 PTPN4P29074 926 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 PTGIRP43119 386 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 RPL21P46778 160 aaKnown RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 CABP4P57796 275 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 IL9RQ01113 521 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 SLC34A1Q06495 639 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 AP1B1Q10567 949 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 LSAMPQ13449 338 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 PRPF4BQ13523 1007 aaKnown RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 PUM3Q15397 648 aaKnown RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 INF2Q27J81 1249 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 LRRC74BQ6ZQY2 392 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 OTUD6AQ7L8S5 288 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 MYLK4Q86YV6 388 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 ARHGEF1Q92888 912 aaKnown RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 GLG1Q92896 1179 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 CCDC97Q96F63 343 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-202ENST00000491922 OLFM3Q96PB7 478 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 SPZ1Q9BXG8 430 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 PREBQ9HCU5 417 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 PCYOX1Q9UHG3 505 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 LNPEPQ9UIQ6 1025 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 PCDHA6Q9UN73 950 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 CHKBQ9Y259 395 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 NR2E1Q9Y466 385 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 PCDHA8Q9Y5H6 950 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 UBR2Q8IWV8 1755 aa6.92□□□□□ -1.3
CCDC6-202ENST00000491922 NCANO14594 1321 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 PFASO15067 1338 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 MAP3K7O43318 606 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 GFPT2O94808 682 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 FGRP09769 529 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 KRT13P13646 458 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 TAC1P20366 129 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 SESN3P58005 492 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 GIT2Q14161 759 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 LONRF1Q17RB8 773 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 C4orf50Q6ZRC1 276 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 CYFIP1Q7L576 1253 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 PROSER2Q86WR7 435 aaPredicted RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 CCNJLQ8IV13 435 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 NELFCDQ8IXH7 590 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 ZBTB38Q8NAP3 1195 aaPredicted RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 RASGRP4Q8TDF6 673 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 LARP4BQ92615 738 aaKnown RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 ART4Q93070 314 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 NT5C3AQ9H0P0 336 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 DHX36Q9H2U1 1008 aaKnown RBP6.91□□□□□ -1.3
CCDC6-202ENST00000491922 ERVK-5Q9HDB9 667 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 SAR1AQ9NR31 198 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 ZNF510Q9Y2H8 683 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 ACTL7BQ9Y614 415 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 TNS3Q68CZ2 1445 aa6.91□□□□□ -1.3
CCDC6-202ENST00000491922 WNK3Q9BYP7 1800 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms