RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 SMAD4Q13485 552 aaKnown RBP16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 STK38Q15208 465 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 CLUL1Q15846 466 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 KRT79Q5XKE5 535 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 CATSPER3Q86XQ3 398 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 LRRC71Q8N4P6 559 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 KCTD17Q8N5Z5 321 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 NIFKQ9BYG3 293 aaKnown RBP16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 IGFLR1Q9H665 355 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 ELAC1Q9H777 363 aaKnown RBP16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 NRBP2Q9NSY0 501 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 RNF19AQ9NV58 838 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 TMEM161AQ9NX61 479 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 CLEC1BQ9P126 229 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 PPME1Q9Y570 386 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 PCDHGC5Q9Y5F6 944 aa16.72■□□□□ 0.27
CDC42SE1-205ENST00000491825 TBKBP1A7MCY6 615 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 PRR33A8MZF0 331 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 SPTLC2O15270 562 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 MED24O75448 989 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 EYA4O95677 639 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 GLP2RO95838 553 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 FGFR1P11362 822 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 YWHABP31946 246 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 NLRP11P59045 1033 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 CTTNQ14247 550 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 TARBP2Q15633 366 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 HYIQ5T013 277 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 EFCAB12Q6NXP0 572 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 ANO5Q75V66 913 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 EFHBQ8N7U6 833 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 KRI1Q8N9T8 703 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 MAP7D2Q96T17 732 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 MMTAG2Q9BU76 263 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 CWH43Q9H720 699 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 CHMP5Q9NZZ3 219 aa16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 TFIP11Q9UBB9 837 aaKnown RBP16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 SEPT9Q9UHD8 586 aaPredicted RBP16.71■□□□□ 0.27
CDC42SE1-205ENST00000491825 PP2D1A8MPX8 630 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 DCXO43602 365 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 XRCC6P12956 609 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 ALADP13716 330 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 MARCKSP29966 332 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 GPC3P51654 580 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 UBE3AQ05086 875 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 GRIN1Q05586 938 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 FOXD4L6Q3SYB3 417 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 FOXD4L3Q6VB84 417 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 TPH2Q8IWU9 490 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 COLGALT1Q8NBJ5 622 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 SMRP1Q8NCR6 262 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 PPP2R3CQ969Q6 453 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 CEP89Q96ST8 783 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 ATP6V0A4Q9HBG4 840 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 TYW1Q9NV66 732 aaKnown RBP16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 CD207Q9UJ71 328 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 AKT3Q9Y243 479 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 HCN4Q9Y3Q4 1203 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 TCHHQ07283 1943 aa16.7■□□□□ 0.26
CDC42SE1-205ENST00000491825 FGF18O76093 207 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 EIF4BP23588 611 aaKnown RBP16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 NRIP1P48552 1158 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 POTEGQ6S5H5 508 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 OTUD6AQ7L8S5 288 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 ZNF710Q8N1W2 664 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 ZNF579Q8NAF0 562 aaKnown RBP16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 NACC1Q96RE7 527 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 SCAND2PQ9GZW5 306 aaPredicted RBP16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 TMEM117Q9H0C3 514 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 CYP26B1Q9NR63 512 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 ANKEF1Q9NU02 776 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 DBR1Q9UK59 544 aaKnown RBP16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 PCDHB12Q9Y5F1 795 aa16.69■□□□□ 0.26
CDC42SE1-205ENST00000491825 FSCN2O14926 492 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 DARSP14868 501 aaKnown RBP16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 TMOD1P28289 359 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 CDC25AP30304 524 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 NDUFV1P49821 464 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 ERVFC1P60507 584 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 COASYQ13057 564 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 DRP2Q13474 957 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 ECM1Q16610 540 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 LRRC55Q6ZSA7 311 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 VN1R2Q8NFZ6 395 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 FAM122AQ96E09 287 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 ZNF668Q96K58 619 aaPredicted RBP16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 CASD1Q96PB1 797 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 CCSER1Q9C0I3 900 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 NT5C3AQ9H0P0 336 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 TLR9Q9NR96 1032 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 AAASQ9NRG9 546 aa16.68■□□□□ 0.26
CDC42SE1-205ENST00000491825 IGKV6-21A0A0C4DH24 114 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 TMEM150BA6NC51 233 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms