RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SRGAP2CP0DJJ0 459 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 SFPQP23246 707 aaKnown RBP eCLIP14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 RBM10P98175 930 aaKnown RBP14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 LONRF3Q496Y0 759 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 UBXN11Q5T124 520 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 MCTP1Q6DN14 999 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 EP400NLQ6ZTU2 488 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 FERMT3Q86UX7 667 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 LRRC43Q8N309 656 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 C4orf32Q8N8J7 132 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 VN1R2Q8NFZ6 395 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 PSPC1Q8WXF1 523 aaKnown RBP14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 JPH2Q9BR39 696 aaPredicted RBP14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 FOXP1Q9H334 677 aaPredicted RBP14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 IGFLR1Q9H665 355 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 AGPAT5Q9NUQ2 364 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 DACT1Q9NYF0 836 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 CLEC1BQ9P126 229 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 PIN4Q9Y237 131 aaKnown RBP14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 FSCN2O14926 492 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 HOXA2O43364 376 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 NCK2O43639 380 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 B4GALT3O60512 393 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 ZNF623O75123 536 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 MED24O75448 989 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 LAG3P18627 525 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 ARL2P36404 184 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 NRIP1P48552 1158 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 RARRES1P49788 294 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 TOB1P50616 345 aaPredicted RBP14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 AFF1P51825 1210 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 PLCB3Q01970 1234 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 UBE3AQ05086 875 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 NBR1Q14596 966 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 ZNF174Q15697 407 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 CLUL1Q15846 466 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 SPOUT1Q5T280 376 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 KCNT2Q6UVM3 1135 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 OTUD6AQ7L8S5 288 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 CATSPER4Q7RTX7 472 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 CATSPER3Q86XQ3 398 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 NOSTRINQ8IVI9 506 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 THNSL1Q8IYQ7 743 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 EFHBQ8N7U6 833 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 RNF149Q8NC42 400 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 ASAP3Q8TDY4 903 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 PIGOQ8TEQ8 1089 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 MSLNLQ96KJ4 702 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 EPHX3Q9H6B9 360 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 AAASQ9NRG9 546 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 ANKEF1Q9NU02 776 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 FAM105AQ9NUU6 356 aa14.14□□□□□ -0.15
SEC61A1-206ENST00000491668 PER2O15055 1255 aa14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 TWF2Q6IBS0 349 aaKnown RBP14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 SRGAP1Q7Z6B7 1085 aa14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 MRPL10Q7Z7H8 261 aaKnown RBP14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 RBM23Q86U06 439 aaKnown RBP14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 TMEM173Q86WV6 379 aaPredicted RBP14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 SLC39A11Q8N1S5 342 aa14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 MTRQ99707 1265 aa14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 INO80BQ9C086 356 aaPredicted RBP14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 TLR9Q9NR96 1032 aa14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 PCDHB2Q9Y5E7 798 aa14.13□□□□□ -0.15
SEC61A1-206ENST00000491668 HIDE1A8MVS5 230 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 ASAP2O43150 1006 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 GAS2O43903 313 aaKnown RBP14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 OFD1O75665 1012 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 PDIA4P13667 645 aaKnown RBP14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 SYT1P21579 422 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 GLRA2P23416 452 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 U2AF2P26368 475 aaKnown RBP eCLIP14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 TECP42680 631 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 PTENP60484 403 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 ZP2Q05996 745 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 CAPSQ13938 189 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 KCNC3Q14003 757 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 AMHR2Q16671 573 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 CSPP1Q1MSJ5 1256 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 PUS10Q3MIT2 529 aaKnown RBP14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 TTC38Q5R3I4 469 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 AGMOQ6ZNB7 445 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 IFNLR1Q8IU57 520 aaPredicted RBP14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 EXOC8Q8IYI6 725 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 ABI1Q8IZP0 508 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 BCL7CQ8WUZ0 217 aaPredicted RBP14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 TCP11Q8WWU5 503 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 MRPS27Q92552 414 aaKnown RBP14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 ZNF558Q96NG5 402 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 TLE6Q9H808 572 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 C11orf16Q9NQ32 467 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 TBC1D13Q9NVG8 400 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 LZTS1Q9Y250 596 aa14.12□□□□□ -0.15
SEC61A1-206ENST00000491668 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 NT5C1B-RDH14C9J2C7 533 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 MBTPS2O43462 519 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 STX6O43752 255 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 TSPAN1O60635 241 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 DGAT1O75907 488 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 OR52Z1P0C646 297 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 XRCC6P12956 609 aaKnown RBP eCLIP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms