RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 MRPL42Q9Y6G3 142 aaKnown RBP17.77■□□□□ 0.44
PFDN6-207ENST00000491382 TRANK1O15050 2925 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 LRRIQ4A6NIV6 560 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 SLC26A4O43511 780 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 LINC00271P0C7V0 271 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 FGFR1P11362 822 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 AXLP30530 894 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 PPP2R5AQ15172 486 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 ZRSR1Q15695 479 aaKnown RBP17.76■□□□□ 0.43
PFDN6-207ENST00000491382 SPOUT1Q5T280 376 aaKnown RBP17.76■□□□□ 0.43
PFDN6-207ENST00000491382 ZBTB8OSQ8IWT0 167 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 RSPH1Q8WYR4 309 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 MMTAG2Q9BU76 263 aaKnown RBP17.76■□□□□ 0.43
PFDN6-207ENST00000491382 AAASQ9NRG9 546 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 FAM105AQ9NUU6 356 aa17.76■□□□□ 0.43
PFDN6-207ENST00000491382 E9PMD0 336 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 LONP1P36776 959 aaKnown RBP17.75■□□□□ 0.43
PFDN6-207ENST00000491382 UBA7P41226 1012 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 MBTD1Q05BQ5 628 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 HYIQ5T013 277 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.75■□□□□ 0.43
PFDN6-207ENST00000491382 LRRC43Q8N309 656 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 KIFAP3Q92845 792 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 P2RX5Q93086 422 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 PGBD4Q96DM1 585 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 MRPL38Q96DV4 380 aaKnown RBP17.75■□□□□ 0.43
PFDN6-207ENST00000491382 CCDC51Q96ER9 411 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 CALML4Q96GE6 196 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 IFT74Q96LB3 600 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 C2orf40Q9H1Z8 148 aa17.75■□□□□ 0.43
PFDN6-207ENST00000491382 TSPAN1O60635 241 aa17.74■□□□□ 0.43
PFDN6-207ENST00000491382 NAMPTP43490 491 aa17.74■□□□□ 0.43
PFDN6-207ENST00000491382 CSPP1Q1MSJ5 1256 aa17.74■□□□□ 0.43
PFDN6-207ENST00000491382 NOTUMQ6P988 496 aa17.74■□□□□ 0.43
PFDN6-207ENST00000491382 ZNF598Q86UK7 904 aaKnown RBP17.74■□□□□ 0.43
PFDN6-207ENST00000491382 CABP7Q86V35 215 aa17.74■□□□□ 0.43
PFDN6-207ENST00000491382 MRPL9Q9BYD2 267 aaKnown RBP17.74■□□□□ 0.43
PFDN6-207ENST00000491382 LMAN2LQ9H0V9 348 aa17.74■□□□□ 0.43
PFDN6-207ENST00000491382 PCDHB12Q9Y5F1 795 aa17.74■□□□□ 0.43
PFDN6-207ENST00000491382 CLIC4Q9Y696 253 aa17.74■□□□□ 0.43
PFDN6-207ENST00000491382 EYSQ5T1H1 3165 aa17.74■□□□□ 0.43
PFDN6-207ENST00000491382 ZNF623O75123 536 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 ATF7P17544 494 aaPredicted RBP17.73■□□□□ 0.43
PFDN6-207ENST00000491382 LAG3P18627 525 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 HOXA11P31270 313 aaPredicted RBP17.73■□□□□ 0.43
PFDN6-207ENST00000491382 SKIV2LQ15477 1246 aaKnown RBP17.73■□□□□ 0.43
PFDN6-207ENST00000491382 TIGD5Q53EQ6 642 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 CDCA2Q69YH5 1023 aaPredicted RBP17.73■□□□□ 0.43
PFDN6-207ENST00000491382 CNNM3Q8NE01 707 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 RASSF8Q8NHQ8 419 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 DEPTORQ8TB45 409 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 HELQQ8TDG4 1101 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 PRIMPOLQ96LW4 560 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 CASD1Q96PB1 797 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 TIPINQ9BVW5 301 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 TYW1Q9NV66 732 aaKnown RBP17.73■□□□□ 0.43
PFDN6-207ENST00000491382 PRMT7Q9NVM4 692 aaPredicted RBP17.73■□□□□ 0.43
PFDN6-207ENST00000491382 PCDHB2Q9Y5E7 798 aa17.73■□□□□ 0.43
PFDN6-207ENST00000491382 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
PFDN6-207ENST00000491382 PTPAQ15257 358 aa17.72■□□□□ 0.43
PFDN6-207ENST00000491382 CLLU1OSQ5K130 101 aa17.72■□□□□ 0.43
PFDN6-207ENST00000491382 FAM173BQ6P4H8 233 aa17.72■□□□□ 0.43
PFDN6-207ENST00000491382 GLB1LQ6UWU2 654 aa17.72■□□□□ 0.43
PFDN6-207ENST00000491382 DRC1Q96MC2 740 aa17.72■□□□□ 0.43
PFDN6-207ENST00000491382 PNMA5Q96PV4 448 aa17.72■□□□□ 0.43
PFDN6-207ENST00000491382 TRIM6Q9C030 488 aaPredicted RBP17.72■□□□□ 0.43
PFDN6-207ENST00000491382 RNF19AQ9NV58 838 aa17.72■□□□□ 0.43
PFDN6-207ENST00000491382 THEGQ9P2T0 379 aa17.72■□□□□ 0.43
PFDN6-207ENST00000491382 MYH11P35749 1972 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 SSBP05455 408 aaKnown RBP eCLIP17.71■□□□□ 0.43
PFDN6-207ENST00000491382 EFNA5P52803 228 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 CEBPZQ03701 1054 aaKnown RBP17.71■□□□□ 0.43
PFDN6-207ENST00000491382 MAPK6Q16659 721 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 TMEM119Q4V9L6 283 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 RINT1Q6NUQ1 792 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 PPP4R3CPQ6ZMV5 832 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 KCNK18Q7Z418 384 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 HACE1Q8IYU2 909 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 SYT2Q8N9I0 419 aaPredicted RBP17.71■□□□□ 0.43
PFDN6-207ENST00000491382 BSNDQ8WZ55 320 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 CPB2Q96IY4 423 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 ZNF396Q96N95 335 aaPredicted RBP17.71■□□□□ 0.43
PFDN6-207ENST00000491382 PLIN2Q99541 437 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 CSRNP2Q9H175 543 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 KCND2Q9NZV8 630 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 PLAGL2Q9UPG8 496 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 PLXNA4Q9HCM2 1894 aa17.71■□□□□ 0.43
PFDN6-207ENST00000491382 CNTNAP2Q9UHC6 1331 aa17.71■□□□□ 0.42
PFDN6-207ENST00000491382 CARNS1A5YM72 827 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 GRM6O15303 877 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 ARF4P18085 180 aaPredicted RBP17.7■□□□□ 0.42
PFDN6-207ENST00000491382 GUCY2CP25092 1073 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 MARCKSP29966 332 aaPredicted RBP17.7■□□□□ 0.42
PFDN6-207ENST00000491382 PPM1AP35813 382 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 DMP1Q13316 513 aaPredicted RBP17.7■□□□□ 0.42
PFDN6-207ENST00000491382 AMHR2Q16671 573 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 FAM187BQ17R55 369 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 TMEM132AQ24JP5 1023 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 UBXN11Q5T124 520 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms