RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 MAN1B1Q9UKM7 699 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 TRPV2Q9Y5S1 764 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 EVPLQ92817 2033 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 DENND3A2RUS2 1198 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 INO80B-WBP1J3KQ70 363 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 K7ERI5 159 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 EIF3DO15371 548 aaKnown RBP eCLIP12.05□□□□□ -0.485e-7■□□□□ 10.2
VARS2-210ENST00000490699 SLC16A4O15374 487 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 PARNO95453 639 aaKnown RBP12.05□□□□□ -0.48
VARS2-210ENST00000490699 CAVIN2O95810 425 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 GPC3P51654 580 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 CRYBB1P53674 252 aaPredicted RBP12.05□□□□□ -0.48
VARS2-210ENST00000490699 SOX10P56693 466 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 NLRP12P59046 1061 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 MAPK7Q13164 816 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 CAPSQ13938 189 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 SNX17Q15036 470 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 TRIM60Q495X7 471 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 RUFY4Q6ZNE9 571 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 RBM43Q6ZSC3 357 aaKnown RBP12.05□□□□□ -0.48
VARS2-210ENST00000490699 HS2ST1Q7LGA3 356 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 HAUS6Q7Z4H7 955 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 DAW1Q8N136 415 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 SPATA20Q8TB22 786 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 GOLGA5Q8TBA6 731 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 ASAP3Q8TDY4 903 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 ERCC4Q92889 916 aaPredicted RBP12.05□□□□□ -0.48
VARS2-210ENST00000490699 ACCSQ96QU6 501 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 NFKBIZQ9BYH8 718 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 SLC39A2Q9NP94 309 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 TMEM39AQ9NV64 488 aa12.05□□□□□ -0.48
VARS2-210ENST00000490699 PRMT7Q9NVM4 692 aaPredicted RBP12.05□□□□□ -0.48
VARS2-210ENST00000490699 A0A087WZ62 844 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 BICDL2A1A5D9 508 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 KLRC4O43908 158 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 CLTBP09497 229 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 CTSHP09668 335 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 MATR3P43243 847 aaKnown RBP eCLIP12.04□□□□□ -0.48
VARS2-210ENST00000490699 SARSP49591 514 aaKnown RBP12.04□□□□□ -0.48
VARS2-210ENST00000490699 NCKAP1LP55160 1127 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 TLE2Q04725 743 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 TYRO3Q06418 890 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 TMEM62Q0P6H9 643 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 DRP2Q13474 957 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 MORC3Q14149 939 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 TPD52L1Q16890 204 aaPredicted RBP12.04□□□□□ -0.48
VARS2-210ENST00000490699 KIZQ2M2Z5 673 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 CT47A1Q5JQC4 288 aaPredicted RBP12.04□□□□□ -0.48
VARS2-210ENST00000490699 ISM2Q6H9L7 571 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 ZNF720Q7Z2F6 126 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 LINC01465Q8N7H1 131 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 USP38Q8NB14 1042 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 ZBTB10Q96DT7 871 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 PPP1R16BQ96T49 567 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 FDXACB1Q9BRP7 624 aaPredicted RBP12.04□□□□□ -0.48
VARS2-210ENST00000490699 NTPCRQ9BSD7 190 aaKnown RBP12.04□□□□□ -0.48
VARS2-210ENST00000490699 CELF4Q9BZC1 486 aaKnown RBP12.04□□□□□ -0.48
VARS2-210ENST00000490699 HIPK3Q9H422 1215 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 ST6GALNAC4Q9H4F1 302 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 TMEM134Q9H6X4 195 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 POLD4Q9HCU8 107 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 PRDM5Q9NQX1 630 aaPredicted RBP12.04□□□□□ -0.48
VARS2-210ENST00000490699 CDY2AQ9Y6F7 541 aa12.04□□□□□ -0.48
VARS2-210ENST00000490699 TRIP12Q14669 1992 aaPredicted RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 HNRNPDLO14979 420 aaKnown RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 GPR182O15218 404 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 CALUO43852 315 aaPredicted RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 CD4P01730 458 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 PRKCBP05771 671 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 SELPP16109 830 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 EIF4BP23588 611 aaKnown RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 NMT1P30419 496 aaKnown RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 LIG4P49917 911 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 PTENP60484 403 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 TPM4P67936 248 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 PRPF4BQ13523 1007 aaKnown RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 CDCA2Q69YH5 1023 aaPredicted RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 FAM43BQ6ZT52 329 aaPredicted RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 LRRC8DQ7L1W4 858 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 CATSPER4Q7RTX7 472 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 KSR1Q8IVT5 923 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 GUF1Q8N442 669 aaKnown RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 TMEM161BQ8NDZ6 487 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 BSNDQ8WZ55 320 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 DHTKD1Q96HY7 919 aaPredicted RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 PRIMPOLQ96LW4 560 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 OSMRQ99650 979 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 ADPGKQ9BRR6 497 aa12.03□□□□□ -0.48
VARS2-210ENST00000490699 MRPL4Q9BYD3 311 aaKnown RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 CGNQ9P2M7 1197 aaKnown RBP12.03□□□□□ -0.48
VARS2-210ENST00000490699 KIAA0100Q14667 2235 aaKnown RBP12.02□□□□□ -0.48
VARS2-210ENST00000490699 RPS6KA5O75582 802 aa12.02□□□□□ -0.49
VARS2-210ENST00000490699 FGFR1OPO95684 399 aaKnown RBP12.02□□□□□ -0.49
VARS2-210ENST00000490699 CKBP12277 381 aa12.02□□□□□ -0.49
VARS2-210ENST00000490699 DARSP14868 501 aaKnown RBP12.02□□□□□ -0.49
VARS2-210ENST00000490699 SNRPFP62306 86 aaKnown RBP12.02□□□□□ -0.49
VARS2-210ENST00000490699 GTF2BQ00403 316 aa12.02□□□□□ -0.49
VARS2-210ENST00000490699 EHHADHQ08426 723 aa12.02□□□□□ -0.49
VARS2-210ENST00000490699 RBL2Q08999 1139 aa12.02□□□□□ -0.49
VARS2-210ENST00000490699 STK4Q13043 487 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms