RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ACCSLQ4AC99 568 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 SLC30A9Q6PML9 568 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.75□□□□□ -0.21
SHOX2-205ENST00000490689 POMGNT1Q8WZA1 660 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 BTBD6Q96KE9 485 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 CFAP57Q96MR6 1250 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 SH3GL3Q99963 347 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 IRAK4Q9NWZ3 460 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 SUCLA2Q9P2R7 463 aaPredicted RBP13.75□□□□□ -0.21
SHOX2-205ENST00000490689 MAP3K7O43318 606 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 COMTP21964 271 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 CDR2Q01850 454 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 XKR9Q5GH70 373 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 FRMD5Q7Z6J6 570 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.75□□□□□ -0.21
SHOX2-205ENST00000490689 CCNL1Q9UK58 526 aaPredicted RBP13.75□□□□□ -0.21
SHOX2-205ENST00000490689 hCG_2014768A0A024R1R8 64 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 RASSF10A6NK89 507 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 RSPH10B2B2RC85 870 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 DNM1LO00429 736 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 RSPH10BP0C881 870 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 GAP43P17677 238 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 TRAPPC3LQ5T215 181 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 TMEM154Q6P9G4 183 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.21
SHOX2-205ENST00000490689 VCX3BQ9H321 246 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 ATP6V0A4Q9HBG4 840 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 STOML1Q9UBI4 398 aa13.75□□□□□ -0.21
SHOX2-205ENST00000490689 SIGLEC1Q9BZZ2 1709 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 DCTN3O75935 186 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 AKR1B1P15121 316 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 PON1P27169 355 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 KCNJ2P63252 427 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 KCNMA1Q12791 1236 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 ZNF34Q8IZ26 560 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 HAO1Q9UJM8 370 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 TRPC6Q9Y210 931 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 GRIN2DO15399 1336 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 RASA1P20936 1047 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 TRAF1Q13077 416 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 MAPK7Q13164 816 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 PPP2R5DQ14738 602 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 ATG4AQ8WYN0 398 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 KLF6Q99612 283 aaPredicted RBP13.74□□□□□ -0.21
SHOX2-205ENST00000490689 KDM4CQ9H3R0 1056 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 KLHL11Q9NVR0 708 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 PPP1R9AQ9ULJ8 1098 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 DIS3Q9Y2L1 958 aaKnown RBP13.74□□□□□ -0.21
SHOX2-205ENST00000490689 ZBTB5O15062 677 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 CYP26A1O43174 497 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 PHF2O75151 1096 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 CTCFP49711 727 aaPredicted RBP13.74□□□□□ -0.21
SHOX2-205ENST00000490689 FAM182BQ5T319 152 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 AADACL2Q6P093 401 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 SYT2Q8N9I0 419 aaPredicted RBP13.74□□□□□ -0.21
SHOX2-205ENST00000490689 NEDD1Q8NHV4 660 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 ACTRT1Q8TDG2 376 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 AGAP11Q8TF27 550 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 TATDN2Q93075 761 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 NPHS2Q9NP85 383 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 EMSYQ7Z589 1322 aa13.74□□□□□ -0.21
SHOX2-205ENST00000490689 PFDN1O60925 122 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 PHBP35232 272 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 ALDH5A1P51649 535 aaPredicted RBP13.73□□□□□ -0.21
SHOX2-205ENST00000490689 LRRC36Q1X8D7 754 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 RBM26Q5T8P6 1007 aaKnown RBP13.73□□□□□ -0.21
SHOX2-205ENST00000490689 BBOF1Q8ND07 529 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 SYN2Q92777 582 aaPredicted RBP13.73□□□□□ -0.21
SHOX2-205ENST00000490689 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 ZNF577Q9BSK1 485 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 OSBPL7Q9BZF2 842 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 GINM1Q9NU53 330 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 EXOC7Q9UPT5 735 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 CYTH3O43739 400 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 UPP2O95045 317 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 MT-ND3P03897 115 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 INHBAP08476 426 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 RANBP1P43487 201 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 COG7P83436 770 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 QRICH1Q2TAL8 776 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 TBC1D9BQ66K14 1250 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 BAP1Q92560 729 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 PPARGC1AQ9UBK2 798 aaKnown RBP13.73□□□□□ -0.21
SHOX2-205ENST00000490689 SPATA31A3Q5VYP0 1347 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 KITP10721 976 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 BASP1P80723 227 aaKnown RBP13.73□□□□□ -0.21
SHOX2-205ENST00000490689 FAM98CQ17RN3 349 aaKnown RBP13.73□□□□□ -0.21
SHOX2-205ENST00000490689 EPC2Q52LR7 807 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 MDH1BQ5I0G3 518 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
SHOX2-205ENST00000490689 BLOC1S4Q9NUP1 217 aa13.73□□□□□ -0.21
SHOX2-205ENST00000490689 HNRNPDLO14979 420 aaKnown RBP13.72□□□□□ -0.21
SHOX2-205ENST00000490689 PJA2O43164 708 aa13.72□□□□□ -0.21
SHOX2-205ENST00000490689 KLC1Q07866 573 aa13.72□□□□□ -0.21
SHOX2-205ENST00000490689 LRRC23Q53EV4 343 aaPredicted RBP13.72□□□□□ -0.21
SHOX2-205ENST00000490689 IZUMO3Q5VZ72 239 aa13.72□□□□□ -0.21
SHOX2-205ENST00000490689 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
SHOX2-205ENST00000490689 LRP10Q7Z4F1 713 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms