RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 SLC11A1P49279 550 aa18.38■□□□□ 0.53
SNAP29-203ENST00000490458 LRCH2Q5VUJ6 765 aa18.38■□□□□ 0.53
SNAP29-203ENST00000490458 PPFIBP1Q86W92 1011 aa18.38■□□□□ 0.53
SNAP29-203ENST00000490458 SLC5A5Q92911 643 aa18.38■□□□□ 0.53
SNAP29-203ENST00000490458 ACSF2Q96CM8 615 aaPredicted RBP18.38■□□□□ 0.53
SNAP29-203ENST00000490458 CEP89Q96ST8 783 aa18.38■□□□□ 0.53
SNAP29-203ENST00000490458 SH2D3AQ9BRG2 576 aa18.38■□□□□ 0.53
SNAP29-203ENST00000490458 GBP3Q9H0R5 595 aa18.38■□□□□ 0.53
SNAP29-203ENST00000490458 IGKV6-21A0A0C4DH24 114 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 SPDYE4A6NLX3 237 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 OFD1O75665 1012 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 SKIP12755 728 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 AOC1P19801 751 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 RNASELQ05823 741 aaKnown RBP18.37■□□□□ 0.53
SNAP29-203ENST00000490458 OTOP3Q7RTS5 596 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 ADSSL1Q8N142 457 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 PHKBQ93100 1093 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 KLHL5Q96PQ7 755 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 NIFKQ9BYG3 293 aaKnown RBP18.37■□□□□ 0.53
SNAP29-203ENST00000490458 DUSP12Q9UNI6 340 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 NID2Q14112 1375 aa18.37■□□□□ 0.53
SNAP29-203ENST00000490458 RIF1Q5UIP0 2472 aaKnown RBP18.37■□□□□ 0.53
SNAP29-203ENST00000490458 STBD1O95210 358 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 CPA1P15085 419 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 RAB27AP51159 221 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 CLCN4P51793 760 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 FGD1P98174 961 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 CDC42EP1Q00587 391 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 TDGQ13569 410 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 KRT32Q14532 448 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 XKR3Q5GH77 459 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 MIER3Q7Z3K6 550 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 ZNF410Q86VK4 478 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 ZNF280BQ86YH2 543 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 CCDC105Q8IYK2 499 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 CCDC148Q8NFR7 591 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 BICD2Q8TD16 824 aa18.36■□□□□ 0.53
SNAP29-203ENST00000490458 DOCK8Q8NF50 2099 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 ZNF623O75123 536 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 PSMD10O75832 226 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 SSBP05455 408 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNAP29-203ENST00000490458 CNPP09543 421 aaKnown RBP18.35■□□□□ 0.53
SNAP29-203ENST00000490458 Q6ZUG5 572 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 CATSPER4Q7RTX7 472 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 RHPN2Q8IUC4 686 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 RDM1Q8NG50 284 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 BRF1Q92994 677 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 NLRP4Q96MN2 994 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 EMILIN2Q9BXX0 1053 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 INO80BQ9C086 356 aaPredicted RBP18.35■□□□□ 0.53
SNAP29-203ENST00000490458 VPS54Q9P1Q0 977 aa18.35■□□□□ 0.53
SNAP29-203ENST00000490458 SUCLA2Q9P2R7 463 aaPredicted RBP18.35■□□□□ 0.53
SNAP29-203ENST00000490458 TDRD15B5MCY1 1934 aaKnown RBP18.34■□□□□ 0.53
SNAP29-203ENST00000490458 DDHD2O94830 711 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 HMGB1P09429 215 aaKnown RBP18.34■□□□□ 0.53
SNAP29-203ENST00000490458 KLRC2P26717 231 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 DNM2P50570 870 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 USP11P51784 963 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 AKAP17AQ02040 695 aaKnown RBP18.34■□□□□ 0.53
SNAP29-203ENST00000490458 ANGPT1Q15389 498 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 AGMOQ6ZNB7 445 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 KSR1Q8IVT5 923 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 SIX5Q8N196 739 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 URGCPQ8TCY9 931 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 RTP3Q9BQQ7 232 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 KCNK12Q9HB15 430 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 FBXL21Q9UKT6 434 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 MYO15AQ9UKN7 3530 aa18.34■□□□□ 0.53
SNAP29-203ENST00000490458 MTCL1Q9Y4B5 1905 aaKnown RBP18.33■□□□□ 0.53
SNAP29-203ENST00000490458 NARSO43776 548 aaKnown RBP18.33■□□□□ 0.52
SNAP29-203ENST00000490458 LILRB3O75022 631 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 MAFO75444 373 aaPredicted RBP18.33■□□□□ 0.52
SNAP29-203ENST00000490458 ID4P47928 161 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 NTRK3Q16288 839 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 LETM2Q2VYF4 491 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 BMP2KLQ5H9B9 411 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 B3GNT9Q6UX72 402 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 C15orf39Q6ZRI6 1047 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 ERMP1Q7Z2K6 904 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 DTWD2Q8NBA8 298 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 PGBD4Q96DM1 585 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 SLC26A6Q9BXS9 759 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 RNF26Q9BY78 433 aaPredicted RBP18.33■□□□□ 0.52
SNAP29-203ENST00000490458 AGPAT5Q9NUQ2 364 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 PCDHB2Q9Y5E7 798 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 SPTBN4Q9H254 2564 aa18.33■□□□□ 0.52
SNAP29-203ENST00000490458 N4BP1O75113 896 aaKnown RBP18.32■□□□□ 0.52
SNAP29-203ENST00000490458 TDP2O95551 362 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 AFF1P51825 1210 aaKnown RBP18.32■□□□□ 0.52
SNAP29-203ENST00000490458 Q4G0T1 1027 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 PLA2G4FQ68DD2 849 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 TBCKQ8TEA7 893 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 TMEM175Q9BSA9 504 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 RSAD1Q9HA92 442 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 MAN1C1Q9NR34 630 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 MRPL17Q9NRX2 175 aaKnown RBP18.32■□□□□ 0.52
SNAP29-203ENST00000490458 IGSF9Q9P2J2 1179 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 ARID2Q68CP9 1835 aa18.32■□□□□ 0.52
SNAP29-203ENST00000490458 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms