RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ENPP3O14638 875 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 PFKMP08237 780 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 GAAP10253 952 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 LSSP48449 732 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 SCNN1BP51168 640 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 ABHD18Q0P651 414 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 TUBA3CQ13748 450 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 ZBTB41Q5SVQ8 909 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 FNDC7Q5VTL7 733 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 KRT40Q6A162 431 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 MFSD5Q6N075 450 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 TUBA3EQ6PEY2 450 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 Q6ZRM9 215 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 NPM2Q86SE8 214 aaKnown RBP5.55□□□□□ -1.52
HMGN1-218ENST00000490032 UNC5BQ8IZJ1 945 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 CMTM4Q8IZR5 234 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 AMER2Q8N7J2 671 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGN1-218ENST00000490032 SPTLC3Q9NUV7 552 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 MSRAQ9UJ68 235 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 RCAN3Q9UKA8 241 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 PCDHB6Q9Y5E3 794 aa5.55□□□□□ -1.52
HMGN1-218ENST00000490032 A0A087X0B3 334 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 SEC24DO94855 1032 aaPredicted RBP5.54□□□□□ -1.52
HMGN1-218ENST00000490032 PCDH8O95206 1070 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 PEX11BO96011 259 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 LSP1P33241 339 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 MCM7P33993 719 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 ADCYAP1R1P41586 468 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 SCNN1GP51170 649 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 CRHR2Q13324 411 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 SPIDRQ14159 915 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 TERF2Q15554 542 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 ELAVL1Q15717 326 aaKnown RBP5.54□□□□□ -1.52
HMGN1-218ENST00000490032 FKBP15Q5T1M5 1219 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 HTR3DQ70Z44 454 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 CDYL2Q8N8U2 506 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 OR2W6PQ8NHA6 318 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 GPR101Q96P66 508 aaPredicted RBP5.54□□□□□ -1.52
HMGN1-218ENST00000490032 UIMC1Q96RL1 719 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 ENKD1Q9H0I2 346 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGN1-218ENST00000490032 PARPBPQ9NWS1 579 aa5.54□□□□□ -1.52
HMGN1-218ENST00000490032 ING1Q9UK53 422 aaPredicted RBP5.54□□□□□ -1.52
HMGN1-218ENST00000490032 FKBP9O95302 570 aa5.53□□□□□ -1.52
HMGN1-218ENST00000490032 MAN2A2P49641 1150 aa5.53□□□□□ -1.52
HMGN1-218ENST00000490032 GPR15P49685 360 aa5.53□□□□□ -1.52
HMGN1-218ENST00000490032 RABGGTBP53611 331 aa5.53□□□□□ -1.52
HMGN1-218ENST00000490032 SART3Q15020 963 aaKnown RBP5.53□□□□□ -1.52
HMGN1-218ENST00000490032 PLEKHG4Q58EX7 1191 aa5.53□□□□□ -1.52
HMGN1-218ENST00000490032 CCDC178Q5BJE1 867 aa5.53□□□□□ -1.52
HMGN1-218ENST00000490032 FKBP9P1Q75LS8 142 aa5.53□□□□□ -1.52
HMGN1-218ENST00000490032 PIK3C3Q8NEB9 887 aa5.53□□□□□ -1.52
HMGN1-218ENST00000490032 ST20-MTHFSA0A0A6YYL1 179 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 KLRG2A4D1S0 409 aaPredicted RBP5.52□□□□□ -1.53
HMGN1-218ENST00000490032 NPEPPSP55786 919 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 CD69Q07108 199 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 FHL2Q14192 279 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 C1QL3Q5VWW1 255 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 NOP9Q86U38 636 aaKnown RBP5.52□□□□□ -1.53
HMGN1-218ENST00000490032 CXorf67Q86X51 503 aaPredicted RBP5.52□□□□□ -1.53
HMGN1-218ENST00000490032 GSPT2Q8IYD1 628 aaKnown RBP5.52□□□□□ -1.53
HMGN1-218ENST00000490032 MDGA1Q8NFP4 955 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 FERMT2Q96AC1 680 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 ZNF512Q96ME7 567 aaPredicted RBP5.52□□□□□ -1.53
HMGN1-218ENST00000490032 FDXACB1Q9BRP7 624 aaPredicted RBP5.52□□□□□ -1.53
HMGN1-218ENST00000490032 WNT8AQ9H1J5 351 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 EMC7Q9NPA0 242 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 TMPRSS11EQ9UL52 423 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 MAPRE3Q9UPY8 281 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 TBX22Q9Y458 520 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 NUMBLQ9Y6R0 609 aa5.52□□□□□ -1.53
HMGN1-218ENST00000490032 XDHP47989 1333 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 PRSS38A1L453 326 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 LCHNA4D1U4 455 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 NRP1O14786 923 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 MFAP3LO75121 409 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 ALDH1A2O94788 518 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 IPO13O94829 963 aaKnown RBP5.51□□□□□ -1.53
HMGN1-218ENST00000490032 LY86O95711 162 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 MANFP55145 182 aaKnown RBP5.51□□□□□ -1.53
HMGN1-218ENST00000490032 IL2P60568 153 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 SLC25A3Q00325 362 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 CNGB1Q14028 1251 aaPredicted RBP5.51□□□□□ -1.53
HMGN1-218ENST00000490032 TOB2Q14106 344 aaPredicted RBP5.51□□□□□ -1.53
HMGN1-218ENST00000490032 NAIF1Q69YI7 327 aaPredicted RBP5.51□□□□□ -1.53
HMGN1-218ENST00000490032 ZNF662Q6ZS27 426 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 FRMD7Q6ZUT3 714 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 C11orf74Q86VG3 221 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 ZNF483Q8TF39 744 aaPredicted RBP5.51□□□□□ -1.53
HMGN1-218ENST00000490032 GPR87Q9BY21 358 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 MS4A5Q9H3V2 200 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 ING3Q9NXR8 418 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 PPP2R3BQ9Y5P8 575 aa5.51□□□□□ -1.53
HMGN1-218ENST00000490032 SUV39H1O43463 412 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 NRP2O60462 931 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 PDE8AO60658 829 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 STC2O76061 302 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 BPIP17213 487 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 TAS1R1Q7RTX1 841 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms