RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 AIFM3Q96NN9 605 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 INPP4AQ96PE3 977 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 NAP1L3Q99457 506 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SELENOSQ9BQE4 189 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 TXLNGYQ9BZA5 131 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 NACA2Q9H009 215 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 KLHL14Q9P2G3 628 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 MAGEC2Q9UBF1 373 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SEC63Q9UGP8 760 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 CNOT7Q9UIV1 285 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 TBC1D30Q9Y2I9 924 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 FCF1Q9Y324 198 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 FAM208AQ9UK61 1670 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 UTYO14607 1347 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 TNRQ92752 1358 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 A0A1W2PRU2 124 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 GNAT3A8MTJ3 354 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 CCDC188H7C350 402 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ERVH48-1M5A8F1 160 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 TRAFD1O14545 582 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 RGS16O15492 202 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 AKR1B10O60218 316 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 S1PR4O95977 384 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 CYP1A1P04798 512 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 LYNP07948 512 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 CPA3P15088 417 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 GM2AP17900 193 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 EIF4A3P38919 411 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 HDAC4P56524 1084 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SH3BP2P78314 561 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 GPSM2P81274 684 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 RASSF7Q02833 373 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 AP1B1Q10567 949 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 IDI1Q13907 227 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 CYLC2Q14093 348 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 CCDC6Q16204 474 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 P3H1Q32P28 736 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SPDYAQ5MJ70 313 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SNX30Q5VWJ9 437 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 BTNL9Q6UXG8 535 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 LIAT1Q6ZQX7 453 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 USP49Q70CQ1 688 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 KRT26Q7Z3Y9 468 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ATCAYQ86WG3 371 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 CCDC125Q86Z20 511 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 CCDC65Q8IXS2 484 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SAMD3Q8N6K7 520 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 DIS3LQ8TF46 1054 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 NAT14Q8WUY8 206 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 LPIN2Q92539 896 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 TAF4BQ92750 862 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 ERGIC2Q96RQ1 377 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 TUBGCP5Q96RT8 1024 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 UBAC1Q9BSL1 405 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 POLR3CQ9BUI4 534 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 BHMT2Q9H2M3 363 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 EPB41L1Q9H4G0 881 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SLITRK6Q9H5Y7 841 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 TLE6Q9H808 572 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 AIPL1Q9NZN9 384 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 GGT7Q9UJ14 662 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 SYNPO2Q9UMS6 1093 aa5.13□□□□□ -1.59
SNRNP40-206ENST00000489853 PASKQ96RG2 1323 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 PCDH11XQ9BZA7 1347 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 STK36Q9NRP7 1315 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 PALLDQ8WX93 1383 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 NRKQ7Z2Y5 1582 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 A0A087X0B3 334 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 SMIM31A0A1B0GVY4 71 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 HTR3EA5X5Y0 456 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 TRIM43BA6NCK2 446 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 TMEM110-MUSTN1A8MSY1 372 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 TCP11X1B4DZS4 312 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 RBAK-RBAKDNI3L0D1 243 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ZBTB39O15060 712 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 GPR182O15218 404 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 HNRNPCL1O60812 293 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 PTCD1O75127 700 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ASMTLO95671 621 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 BMP15O95972 392 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 MMP1P03956 469 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ALDH2P05091 517 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 VAV1P15498 845 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 VARSP26640 1264 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 FLT3P36888 993 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 CCNFP41002 786 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 METAP2P50579 478 aaKnown RBP eCLIP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 CDK7P50613 346 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 RTP1P59025 263 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 PDE1BQ01064 536 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 SLC34A1Q06495 639 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 SSRP1Q08945 709 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 SPIDRQ14159 915 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 NAB2Q15742 525 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ADRM1Q16186 407 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 TNFAIP8L3Q5GJ75 292 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 INTS6LQ5JSJ4 861 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 C3orf62Q6ZUJ4 267 aa5.12□□□□□ -1.59
SNRNP40-206ENST00000489853 ARHGAP27Q6ZUM4 889 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms