RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 ZNF888P0CJ79 500 aaPredicted RBP7.53□□□□□ -1.2
VPS26A-206ENST00000489794 RECQLP46063 649 aaPredicted RBP7.53□□□□□ -1.2
VPS26A-206ENST00000489794 SRSF2Q01130 221 aaKnown RBP7.53□□□□□ -1.2
VPS26A-206ENST00000489794 TTF1Q15361 905 aaPredicted RBP7.53□□□□□ -1.2
VPS26A-206ENST00000489794 LARP4Q71RC2 724 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS26A-206ENST00000489794 KCNC2Q96PR1 638 aa7.53□□□□□ -1.2
VPS26A-206ENST00000489794 UIMC1Q96RL1 719 aa7.53□□□□□ -1.2
VPS26A-206ENST00000489794 SOX7Q9BT81 388 aa7.53□□□□□ -1.2
VPS26A-206ENST00000489794 ACE2Q9BYF1 805 aaPredicted RBP7.53□□□□□ -1.2
VPS26A-206ENST00000489794 C14orf93Q9H972 538 aaKnown RBP7.53□□□□□ -1.2
VPS26A-206ENST00000489794 EVLQ9UI08 416 aaPredicted RBP7.53□□□□□ -1.2
VPS26A-206ENST00000489794 DNAI1Q9UI46 699 aa7.53□□□□□ -1.2
VPS26A-206ENST00000489794 CTDP1Q9Y5B0 961 aaPredicted RBP7.53□□□□□ -1.2
VPS26A-206ENST00000489794 PMS2P1A4D2B8 440 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 ARHGAP6O43182 974 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 SNUPNO95149 360 aaKnown RBP7.52□□□□□ -1.21
VPS26A-206ENST00000489794 CELA3BP08861 270 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 BMP7P18075 431 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 RRADP55042 308 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 GAREM2Q75VX8 874 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 GPR155Q7Z3F1 870 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 FRMD5Q7Z6J6 570 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 CLEC14AQ86T13 490 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS26A-206ENST00000489794 SEC61A2Q9H9S3 476 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS26A-206ENST00000489794 INVSQ9Y283 1065 aa7.52□□□□□ -1.21
VPS26A-206ENST00000489794 XPOTO43592 962 aaKnown RBP7.51□□□□□ -1.21
VPS26A-206ENST00000489794 B4GALT3O60512 393 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 VCAM1P19320 739 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 MGAT5Q09328 741 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 GAGE13Q4V321 117 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 EFCAB2Q5VUJ9 269 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 BTNL9Q6UXG8 535 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 LCNL1Q6ZST4 164 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 ARHGEF18Q6ZSZ5 1173 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 PLA2G15Q8NCC3 412 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 CAMKK2Q96RR4 588 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 SLC6A15Q9H2J7 730 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 ZCCHC4Q9H5U6 513 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 AASDHPPTQ9NRN7 309 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 MAGEL2Q9UJ55 1249 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 NR2E1Q9Y466 385 aa7.51□□□□□ -1.21
VPS26A-206ENST00000489794 A0A1W2PR48 441 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 FZD9O00144 591 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 MTSS1O43312 755 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 B4GALT4O60513 344 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 PHF2O75151 1096 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 LY86O95711 162 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 GAAP10253 952 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 WNT3AP56704 352 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 RAC3P60763 192 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 PPP2CBP62714 309 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 PPP2CAP67775 309 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 CDK17Q00537 523 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 MALLQ13021 153 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 ADAM15Q13444 863 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 ACAP2Q15057 778 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 MUM1L1Q5H9M0 696 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 TMEM240Q5SV17 173 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 TSPEARQ8WU66 669 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 FDXACB1Q9BRP7 624 aaPredicted RBP7.5□□□□□ -1.21
VPS26A-206ENST00000489794 KIAA1683Q9H0B3 1180 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 PRDM12Q9H4Q4 367 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 TCF7L1Q9HCS4 588 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 PARD6AQ9NPB6 346 aa7.5□□□□□ -1.21
VPS26A-206ENST00000489794 NRP1O14786 923 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 JUNP05412 331 aaKnown RBP7.49□□□□□ -1.21
VPS26A-206ENST00000489794 LTA4HP09960 611 aaKnown RBP7.49□□□□□ -1.21
VPS26A-206ENST00000489794 OSMP13725 252 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 HNRNPLP14866 589 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS26A-206ENST00000489794 KIR2DL3P43628 341 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 SLC16A1P53985 500 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 CD69Q07108 199 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 MCL1Q07820 350 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 TCIRG1Q13488 830 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 PCBP2Q15366 365 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS26A-206ENST00000489794 ADRM1Q16186 407 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 C19orf54Q5BKX5 351 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 ZFYVE27Q5T4F4 411 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 TAS1R1Q7RTX1 841 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 GREM2Q9H772 168 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 TCEAL9Q9UHQ7 104 aa7.49□□□□□ -1.21
VPS26A-206ENST00000489794 SAP30BPQ9UHR5 308 aaKnown RBP7.49□□□□□ -1.21
VPS26A-206ENST00000489794 PUF60Q9UHX1 559 aaKnown RBP7.49□□□□□ -1.21
VPS26A-206ENST00000489794 EPHB4P54760 987 aa7.48□□□□□ -1.21
VPS26A-206ENST00000489794 HGFACQ04756 655 aa7.48□□□□□ -1.21
VPS26A-206ENST00000489794 PIN1Q13526 163 aaPredicted RBP7.48□□□□□ -1.21
VPS26A-206ENST00000489794 SYT8Q8NBV8 401 aa7.48□□□□□ -1.21
VPS26A-206ENST00000489794 GLB1L3Q8NCI6 653 aaPredicted RBP7.48□□□□□ -1.21
VPS26A-206ENST00000489794 JDP2Q8WYK2 163 aa7.48□□□□□ -1.21
VPS26A-206ENST00000489794 JADE3Q92613 823 aa7.48□□□□□ -1.21
VPS26A-206ENST00000489794 RABGGTAQ92696 567 aa7.48□□□□□ -1.21
VPS26A-206ENST00000489794 ADI1Q9BV57 179 aa7.48□□□□□ -1.21
VPS26A-206ENST00000489794 PTPN22Q9Y2R2 807 aa7.48□□□□□ -1.21
VPS26A-206ENST00000489794 LUC7L2Q9Y383 392 aaKnown RBP7.48□□□□□ -1.21
VPS26A-206ENST00000489794 RBM8AQ9Y5S9 174 aaKnown RBP7.48□□□□□ -1.21
VPS26A-206ENST00000489794 RPTORQ8N122 1335 aa7.48□□□□□ -1.21
VPS26A-206ENST00000489794 LAMTOR5O43504 91 aa7.47□□□□□ -1.21
VPS26A-206ENST00000489794 VSIG10L2P0DP72 767 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms