RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 GCOM2Q9BZD3 368 aaPredicted RBP11.32□□□□□ -0.6
CSF3R-213ENST00000489551 MINDY3Q9H8M7 445 aa11.32□□□□□ -0.6
CSF3R-213ENST00000489551 ZSWIM6Q9HCJ5 1215 aa11.32□□□□□ -0.6
CSF3R-213ENST00000489551 CHST12Q9NRB3 414 aa11.32□□□□□ -0.6
CSF3R-213ENST00000489551 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
CSF3R-213ENST00000489551 SUCLA2Q9P2R7 463 aaPredicted RBP11.32□□□□□ -0.6
CSF3R-213ENST00000489551 IRAK3Q9Y616 596 aa11.32□□□□□ -0.6
CSF3R-213ENST00000489551 TRIP11Q15643 1979 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 DDX11L8A8MPP1 907 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 ZBTB39O15060 712 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 ZNF623O75123 536 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 ZC3H11AO75152 810 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSF3R-213ENST00000489551 SRGAP2BP0DMP2 458 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 CTSAP10619 480 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 SLC11A1P49279 550 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 ALDH7A1P49419 539 aaKnown RBP11.31□□□□□ -0.6
CSF3R-213ENST00000489551 ITIH3Q06033 890 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 UBXN11Q5T124 520 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 RARS2Q5T160 578 aaKnown RBP11.31□□□□□ -0.6
CSF3R-213ENST00000489551 AGMOQ6ZNB7 445 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
CSF3R-213ENST00000489551 BLIDQ8IZY5 108 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 DAGLBQ8NCG7 672 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 TMEM169Q96HH4 297 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 GJB4Q9NTQ9 266 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 FAM105AQ9NUU6 356 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 VAV3Q9UKW4 847 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 KCNJ14Q9UNX9 436 aa11.31□□□□□ -0.6
CSF3R-213ENST00000489551 PIN4Q9Y237 131 aaKnown RBP11.31□□□□□ -0.6
CSF3R-213ENST00000489551 SPTBN4Q9H254 2564 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.3□□□□□ -0.6
CSF3R-213ENST00000489551 H0Y858 1186 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 LILRB3O75022 631 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 HOXA11P31270 313 aaPredicted RBP11.3□□□□□ -0.6
CSF3R-213ENST00000489551 SSRP1Q08945 709 aaKnown RBP11.3□□□□□ -0.6
CSF3R-213ENST00000489551 PTPN14Q15678 1187 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 INF2Q27J81 1249 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 NOMO2Q5JPE7 1267 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 EARS2Q5JPH6 523 aaKnown RBP11.3□□□□□ -0.6
CSF3R-213ENST00000489551 TWF2Q6IBS0 349 aaKnown RBP11.3□□□□□ -0.6
CSF3R-213ENST00000489551 KIAA1841Q6NSI8 718 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 MOXD1Q6UVY6 613 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 MRPL10Q7Z7H8 261 aaKnown RBP11.3□□□□□ -0.6
CSF3R-213ENST00000489551 ZNF410Q86VK4 478 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 TMEM105Q8N8V8 129 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 HAS1Q92839 578 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 NLRP4Q96MN2 994 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 MRPL9Q9BYD2 267 aaKnown RBP11.3□□□□□ -0.6
CSF3R-213ENST00000489551 GBP3Q9H0R5 595 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 KCNMB3Q9NPA1 279 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 SORCS3Q9UPU3 1222 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 DNAH14Q0VDD8 3507 aa11.3□□□□□ -0.6
CSF3R-213ENST00000489551 RIF1Q5UIP0 2472 aaKnown RBP11.29□□□□□ -0.6
CSF3R-213ENST00000489551 DEXIO95424 95 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 SFPQP23246 707 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSF3R-213ENST00000489551 PSMA5P28066 241 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 CA8P35219 290 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
CSF3R-213ENST00000489551 PSMC5P62195 406 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 CDC42EP1Q00587 391 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 STK3Q13188 491 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 PPP2R5CQ13362 524 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 CES5AQ6NT32 575 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 TMC5Q6UXY8 1006 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 TAS1R1Q7RTX1 841 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 CATSPER4Q7RTX7 472 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 ZBTB33Q86T24 672 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 TMEM143Q96AN5 459 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 ZNF274Q96GC6 653 aaPredicted RBP11.29□□□□□ -0.6
CSF3R-213ENST00000489551 PRRX2Q99811 253 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 DHX33Q9H6R0 707 aaKnown RBP11.29□□□□□ -0.6
CSF3R-213ENST00000489551 CYP26B1Q9NR63 512 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
CSF3R-213ENST00000489551 AGPAT5Q9NUQ2 364 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 DDX25Q9UHL0 483 aaKnown RBP11.29□□□□□ -0.6
CSF3R-213ENST00000489551 NR2E1Q9Y466 385 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 PCDHB2Q9Y5E7 798 aa11.29□□□□□ -0.6
CSF3R-213ENST00000489551 PTPRZ1P23471 2315 aaPredicted RBP11.29□□□□□ -0.6
CSF3R-213ENST00000489551 FAM186AA6NE01 2351 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 F8W810 466 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 N4BP1O75113 896 aaKnown RBP11.28□□□□□ -0.6
CSF3R-213ENST00000489551 EFEMP2O95967 443 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
CSF3R-213ENST00000489551 MTHFRP42898 656 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 DNM2P50570 870 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 CLCN4P51793 760 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 SPIRE1Q08AE8 756 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSF3R-213ENST00000489551 LETM2Q2VYF4 491 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 GLB1LQ6UWU2 654 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 ZDHHC14Q8IZN3 488 aa11.28□□□□□ -0.6
CSF3R-213ENST00000489551 SMG8Q8ND04 991 aaKnown RBP11.28□□□□□ -0.6
CSF3R-213ENST00000489551 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms