RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 IRAK3Q9Y616 596 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 CYP46A1Q9Y6A2 500 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 KMT2EQ8IZD2 1858 aa13.38□□□□□ -0.27
SFXN3-207ENST00000489434 RIF1Q5UIP0 2472 aaKnown RBP13.37□□□□□ -0.27
SFXN3-207ENST00000489434 IGKV6-21A0A0C4DH24 114 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 ST18O60284 1047 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 ZNF623O75123 536 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 TDP2O95551 362 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 CTSAP10619 480 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 VCPP55072 806 aaKnown RBP13.37□□□□□ -0.27
SFXN3-207ENST00000489434 TCF15Q12870 199 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 NONOQ15233 471 aaKnown RBP eCLIP13.37□□□□□ -0.27
SFXN3-207ENST00000489434 RARS2Q5T160 578 aaKnown RBP13.37□□□□□ -0.27
SFXN3-207ENST00000489434 RUFY3Q7L099 469 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 KRT25Q7Z3Z0 450 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 CABP7Q86V35 215 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 ATOH1Q92858 354 aaPredicted RBP13.37□□□□□ -0.27
SFXN3-207ENST00000489434 LPPQ93052 612 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 IGSF21Q96ID5 467 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 NLRP4Q96MN2 994 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 GBP3Q9H0R5 595 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 ZBP1Q9H171 429 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 POMKQ9H5K3 350 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 FAM105AQ9NUU6 356 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 TBC1D13Q9NVG8 400 aa13.37□□□□□ -0.27
SFXN3-207ENST00000489434 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
SFXN3-207ENST00000489434 CCDC194A0A1B0GVG4 234 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 TMEM150BA6NC51 233 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 C2CD4DB7Z1M9 353 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 EDIL3O43854 480 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 MARCH6O60337 910 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 GALTP07902 379 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 QARSP47897 775 aaKnown RBP13.36□□□□□ -0.27
SFXN3-207ENST00000489434 LONRF3Q496Y0 759 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 KIAA1841Q6NSI8 718 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 DAGLBQ8NCG7 672 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 ZNF274Q96GC6 653 aaPredicted RBP13.36□□□□□ -0.27
SFXN3-207ENST00000489434 FAM20AQ96MK3 541 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 FAM193BQ96PV7 902 aaPredicted RBP13.36□□□□□ -0.27
SFXN3-207ENST00000489434 PHOX2BQ99453 314 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 SH2D3AQ9BRG2 576 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 EMILIN2Q9BXX0 1053 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 CYP26B1Q9NR63 512 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 KANSL3Q9P2N6 904 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 USTQ9Y2C2 406 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 PPME1Q9Y570 386 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 PCDHB2Q9Y5E7 798 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
SFXN3-207ENST00000489434 WDR87Q6ZQQ6 2873 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 EPB41L2O43491 1005 aaKnown RBP13.35□□□□□ -0.27
SFXN3-207ENST00000489434 CDKL5O76039 1030 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 STBD1O95210 358 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 GCFC2P16383 781 aaKnown RBP13.35□□□□□ -0.27
SFXN3-207ENST00000489434 XBP1P17861 261 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 LETM2Q2VYF4 491 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 ELMSAN1Q6PJG2 1045 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 B3GNT9Q6UX72 402 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 ANO5Q75V66 913 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 KSR1Q8IVT5 923 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 ZDHHC14Q8IZN3 488 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 C12orf76Q8N812 135 aaPredicted RBP13.35□□□□□ -0.27
SFXN3-207ENST00000489434 PSPC1Q8WXF1 523 aaKnown RBP13.35□□□□□ -0.27
SFXN3-207ENST00000489434 AUTS2Q8WXX7 1259 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 ACSF2Q96CM8 615 aaPredicted RBP13.35□□□□□ -0.27
SFXN3-207ENST00000489434 MBOAT7Q96N66 472 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 NAP1L4Q99733 375 aaKnown RBP13.35□□□□□ -0.27
SFXN3-207ENST00000489434 MFSD1Q9H3U5 465 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 NRDE2Q9H7Z3 1164 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 AGPAT5Q9NUQ2 364 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 LIMD1Q9UGP4 676 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 CDH22Q9UJ99 828 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 USP34Q70CQ2 3546 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 CNTNAP2Q9UHC6 1331 aa13.35□□□□□ -0.27
SFXN3-207ENST00000489434 SPTBN4Q9H254 2564 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 GAS2O43903 313 aaKnown RBP13.34□□□□□ -0.27
SFXN3-207ENST00000489434 GFRA3O60609 400 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 OFD1O75665 1012 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 BRD1O95696 1058 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 ALDH2P05091 517 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
SFXN3-207ENST00000489434 WEE2P0C1S8 567 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 EPCAMP16422 314 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 RFC5P40937 340 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 NCBP1Q09161 790 aaKnown RBP13.34□□□□□ -0.27
SFXN3-207ENST00000489434 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 INF2Q27J81 1249 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 PLA2G4FQ68DD2 849 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 TMC5Q6UXY8 1006 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 OTUD6AQ7L8S5 288 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 OTOP3Q7RTS5 596 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 SRGAP1Q7Z6B7 1085 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 TMEM173Q86WV6 379 aaPredicted RBP13.34□□□□□ -0.27
SFXN3-207ENST00000489434 SLC22A17Q8WUG5 538 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 TCP11Q8WWU5 503 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms