RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 ITGB1P05556 798 aa21.11■□□□□ 0.97
MRPL55-230ENST00000489430 ATF7P17544 494 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-230ENST00000489430 IBSPP21815 317 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-230ENST00000489430 HOXA11P31270 313 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-230ENST00000489430 SPOUT1Q5T280 376 aaKnown RBP21.11■□□□□ 0.97
MRPL55-230ENST00000489430 ARL6IP4Q66PJ3 421 aaKnown RBP21.11■□□□□ 0.97
MRPL55-230ENST00000489430 CNNM3Q8NE01 707 aa21.11■□□□□ 0.97
MRPL55-230ENST00000489430 PGBD4Q96DM1 585 aa21.11■□□□□ 0.97
MRPL55-230ENST00000489430 CWH43Q9H720 699 aa21.11■□□□□ 0.97
MRPL55-230ENST00000489430 MINDY3Q9H8M7 445 aa21.11■□□□□ 0.97
MRPL55-230ENST00000489430 BMP2KQ9NSY1 1161 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-230ENST00000489430 LZTS1Q9Y250 596 aa21.11■□□□□ 0.97
MRPL55-230ENST00000489430 REV3LO60673 3130 aa21.11■□□□□ 0.97
MRPL55-230ENST00000489430 CUL9Q8IWT3 2517 aa21.11■□□□□ 0.97
MRPL55-230ENST00000489430 ERLIN2O94905 339 aa21.1■□□□□ 0.97
MRPL55-230ENST00000489430 CYP11B2P19099 503 aa21.1■□□□□ 0.97
MRPL55-230ENST00000489430 GLRA2P23416 452 aa21.1■□□□□ 0.97
MRPL55-230ENST00000489430 PPM1AP35813 382 aa21.1■□□□□ 0.97
MRPL55-230ENST00000489430 CCT6AP40227 531 aaKnown RBP21.1■□□□□ 0.97
MRPL55-230ENST00000489430 ATP2C1P98194 919 aaPredicted RBP21.1■□□□□ 0.97
MRPL55-230ENST00000489430 PLCB3Q01970 1234 aa21.1■□□□□ 0.97
MRPL55-230ENST00000489430 CLLU1OSQ5K130 101 aa21.1■□□□□ 0.97
MRPL55-230ENST00000489430 PDE12Q6L8Q7 609 aaKnown RBP21.1■□□□□ 0.97
MRPL55-230ENST00000489430 POTEGQ6S5H5 508 aa21.1■□□□□ 0.97
MRPL55-230ENST00000489430 BRAPQ7Z569 592 aa21.1■□□□□ 0.97
MRPL55-230ENST00000489430 INTS4Q96HW7 963 aaKnown RBP21.1■□□□□ 0.97
MRPL55-230ENST00000489430 UBE2ZQ9H832 354 aaPredicted RBP21.1■□□□□ 0.97
MRPL55-230ENST00000489430 ALG13Q9NP73 1137 aaKnown RBP21.1■□□□□ 0.97
MRPL55-230ENST00000489430 ARHGEF35A5YM69 484 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 USO1O60763 962 aaKnown RBP21.09■□□□□ 0.97
MRPL55-230ENST00000489430 BMP15O95972 392 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 BMP1P13497 986 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 TFF2Q03403 129 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 CAPSQ13938 189 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 CAMK1Q14012 370 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 TCEAL5Q5H9L2 206 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 KRT79Q5XKE5 535 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 PADI6Q6TGC4 694 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 GLB1LQ6UWU2 654 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 MRPL10Q7Z7H8 261 aaKnown RBP21.09■□□□□ 0.97
MRPL55-230ENST00000489430 COLGALT1Q8NBJ5 622 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 RNF169Q8NCN4 708 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 ASAP3Q8TDY4 903 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 POF1BQ8WVV4 589 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 PABPC5Q96DU9 382 aaKnown RBP21.09■□□□□ 0.97
MRPL55-230ENST00000489430 POLR3FQ9H1D9 316 aaPredicted RBP21.09■□□□□ 0.97
MRPL55-230ENST00000489430 PCDHB2Q9Y5E7 798 aa21.09■□□□□ 0.97
MRPL55-230ENST00000489430 CNTNAP2Q9UHC6 1331 aa21.08■□□□□ 0.97
MRPL55-230ENST00000489430 FSD2A1L4K1 749 aa21.08■□□□□ 0.97
MRPL55-230ENST00000489430 FGF18O76093 207 aa21.08■□□□□ 0.97
MRPL55-230ENST00000489430 MBTD1Q05BQ5 628 aa21.08■□□□□ 0.97
MRPL55-230ENST00000489430 PUS10Q3MIT2 529 aaKnown RBP21.08■□□□□ 0.97
MRPL55-230ENST00000489430 NOTUMQ6P988 496 aa21.08■□□□□ 0.97
MRPL55-230ENST00000489430 LRRC55Q6ZSA7 311 aa21.08■□□□□ 0.97
MRPL55-230ENST00000489430 PRIMPOLQ96LW4 560 aa21.08■□□□□ 0.97
MRPL55-230ENST00000489430 ZNF558Q96NG5 402 aa21.08■□□□□ 0.97
MRPL55-230ENST00000489430 UBN1Q9NPG3 1134 aa21.08■□□□□ 0.97
MRPL55-230ENST00000489430 PUF60Q9UHX1 559 aaKnown RBP21.08■□□□□ 0.97
MRPL55-230ENST00000489430 NLRC5Q86WI3 1866 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 INO80B-WBP1J3KQ70 363 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 TSPAN1O60635 241 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 CTC1Q2NKJ3 1217 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 LEXMQ3ZCV2 418 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 CDCA2Q69YH5 1023 aaPredicted RBP21.07■□□□□ 0.96
MRPL55-230ENST00000489430 KCNT2Q6UVM3 1135 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 THNSL1Q8IYQ7 743 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 HELQQ8TDG4 1101 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 SNX29Q8TEQ0 813 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 C2orf40Q9H1Z8 148 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 KIAA1024Q9UPX6 916 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 DNM3Q9UQ16 869 aa21.07■□□□□ 0.96
MRPL55-230ENST00000489430 A0A087WWV3 80 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 SLC26A4O43511 780 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 NCLP19338 710 aaKnown RBP21.06■□□□□ 0.96
MRPL55-230ENST00000489430 DNAJB1P25685 340 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 KRT17Q04695 432 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 PPP2R5AQ15172 486 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 PPP4R3CPQ6ZMV5 832 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 ADAMTS19Q8TE59 1207 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 KIFAP3Q92845 792 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 BHMT2Q9H2M3 363 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 DDX19AQ9NUU7 478 aaKnown RBP21.06■□□□□ 0.96
MRPL55-230ENST00000489430 KANSL3Q9P2N6 904 aa21.06■□□□□ 0.96
MRPL55-230ENST00000489430 TTC28Q96AY4 2481 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 OFD1O75665 1012 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 NAMPTP43490 491 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 ALDH7A1P49419 539 aaKnown RBP21.05■□□□□ 0.96
MRPL55-230ENST00000489430 IL17AQ16552 155 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 ECM1Q16610 540 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 AMHR2Q16671 573 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 FAM187BQ17R55 369 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 NOMO2Q5JPE7 1267 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 HYIQ5T013 277 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 UBXN11Q5T124 520 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 ZBTB8OSQ8IWT0 167 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 MRPS27Q92552 414 aaKnown RBP21.05■□□□□ 0.96
MRPL55-230ENST00000489430 AK8Q96MA6 479 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 CSRNP2Q9H175 543 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 GPRC5CQ9NQ84 441 aa21.05■□□□□ 0.96
MRPL55-230ENST00000489430 TLR9Q9NR96 1032 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms