RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 HMGB1P09429 215 aaKnown RBP12.12□□□□□ -0.47
YIPF3-207ENST00000488966 SKIP12755 728 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 NPR3P17342 541 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 SFPQP23246 707 aaKnown RBP eCLIP12.12□□□□□ -0.47
YIPF3-207ENST00000488966 SLC11A1P49279 550 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 CDC42EP1Q00587 391 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 AKAP17AQ02040 695 aaKnown RBP12.12□□□□□ -0.47
YIPF3-207ENST00000488966 RNASELQ05823 741 aaKnown RBP12.12□□□□□ -0.47
YIPF3-207ENST00000488966 NTRK3Q16288 839 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 XKR3Q5GH77 459 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 CCDC149Q6ZUS6 474 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 MIER3Q7Z3K6 550 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 ZNF280BQ86YH2 543 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 RHPN2Q8IUC4 686 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 RDM1Q8NG50 284 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 BRF1Q92994 677 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 KLHL5Q96PQ7 755 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 GBP3Q9H0R5 595 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 SFXN1Q9H9B4 322 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 SUCLA2Q9P2R7 463 aaPredicted RBP12.12□□□□□ -0.47
YIPF3-207ENST00000488966 NID2Q14112 1375 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
YIPF3-207ENST00000488966 CNPP09543 421 aaKnown RBP12.11□□□□□ -0.47
YIPF3-207ENST00000488966 DNM2P50570 870 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 AFF1P51825 1210 aaKnown RBP12.11□□□□□ -0.47
YIPF3-207ENST00000488966 TDGQ13569 410 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 B3GNT9Q6UX72 402 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 AGMOQ6ZNB7 445 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 OTOP3Q7RTS5 596 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 CATSPER4Q7RTX7 472 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 ZNF410Q86VK4 478 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 PPFIBP1Q86W92 1011 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 CCDC148Q8NFR7 591 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 TBCKQ8TEA7 893 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 RSPH1Q8WYR4 309 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 NKD2Q969F2 451 aaPredicted RBP12.11□□□□□ -0.47
YIPF3-207ENST00000488966 NLRP4Q96MN2 994 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
YIPF3-207ENST00000488966 SLC26A6Q9BXS9 759 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
YIPF3-207ENST00000488966 PCDHB2Q9Y5E7 798 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 CFAP54Q96N23 3096 aa12.11□□□□□ -0.47
YIPF3-207ENST00000488966 PTPRZ1P23471 2315 aaPredicted RBP12.1□□□□□ -0.47
YIPF3-207ENST00000488966 CARNS1A5YM72 827 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 DDX11L8A8MPP1 907 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 LILRB3O75022 631 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 MAFO75444 373 aaPredicted RBP12.1□□□□□ -0.47
YIPF3-207ENST00000488966 DDHD2O94830 711 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 TDP2O95551 362 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 AOC1P19801 751 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 KLRC2P26717 231 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 RAB27AP51159 221 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 CLCN4P51793 760 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 NLRP5P59047 1200 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 FOXK2Q01167 660 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 Q4G0T1 1027 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 PLA2G4FQ68DD2 849 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 ANO5Q75V66 913 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 KCNB2Q92953 911 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 ACSF2Q96CM8 615 aaPredicted RBP12.1□□□□□ -0.47
YIPF3-207ENST00000488966 EMILIN2Q9BXX0 1053 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 INO80BQ9C086 356 aaPredicted RBP12.1□□□□□ -0.47
YIPF3-207ENST00000488966 KCNK12Q9HB15 430 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 IFT122Q9HBG6 1241 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 NCOA5Q9HCD5 579 aaKnown RBP12.1□□□□□ -0.47
YIPF3-207ENST00000488966 AGPAT5Q9NUQ2 364 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 DUSP12Q9UNI6 340 aa12.1□□□□□ -0.47
YIPF3-207ENST00000488966 CYP3A7-CYP3A51PA0A087WV96 503 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 IFNAR1P17181 557 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 CYP3A7P24462 503 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 LETM2Q2VYF4 491 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 BLOC1S2Q6QNY1 142 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 CCDC105Q8IYK2 499 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 ADSSL1Q8N142 457 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 SIX5Q8N196 739 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 ETNPPLQ8TBG4 499 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 URGCPQ8TCY9 931 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 PGBD4Q96DM1 585 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 FBXL21Q9UKT6 434 aa12.09□□□□□ -0.47
YIPF3-207ENST00000488966 MYO15AQ9UKN7 3530 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 MYO10Q9HD67 2058 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 EML1O00423 815 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 NARSO43776 548 aaKnown RBP12.08□□□□□ -0.48
YIPF3-207ENST00000488966 N4BP1O75113 896 aaKnown RBP12.08□□□□□ -0.48
YIPF3-207ENST00000488966 CDC45O75419 566 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 POMCP01189 267 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 ALDH2P05091 517 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 PDIA3P30101 505 aaKnown RBP12.08□□□□□ -0.48
YIPF3-207ENST00000488966 HOXA11P31270 313 aaPredicted RBP12.08□□□□□ -0.48
YIPF3-207ENST00000488966 NPEPPSP55786 919 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 PSMC5P62195 406 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 CCT2P78371 535 aaKnown RBP12.08□□□□□ -0.48
YIPF3-207ENST00000488966 ANGPT1Q15389 498 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 UBXN11Q5T124 520 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 C15orf39Q6ZRI6 1047 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 MRPL10Q7Z7H8 261 aaKnown RBP12.08□□□□□ -0.48
YIPF3-207ENST00000488966 FBXL16Q8N461 479 aa12.08□□□□□ -0.48
YIPF3-207ENST00000488966 ZNF579Q8NAF0 562 aaKnown RBP12.08□□□□□ -0.48
YIPF3-207ENST00000488966 DTWD2Q8NBA8 298 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms