RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 DSC3Q14574 896 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 KCTD17Q8N5Z5 321 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 IGSF22Q8N9C0 903 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 ATXN2LQ8WWM7 1075 aaKnown RBP12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 CLP1Q92989 425 aaKnown RBP12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 AK8Q96MA6 479 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 ZNF558Q96NG5 402 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 ADPGKQ9BRR6 497 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 ZSCAN16Q9H4T2 348 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 IFT122Q9HBG6 1241 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 UBN1Q9NPG3 1134 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 AGPAT5Q9NUQ2 364 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 FAM105AQ9NUU6 356 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 INPP5FQ9Y2H2 1132 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 LAMA3Q16787 3333 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 MICAL3Q7RTP6 2002 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 C5orf67F2Z3F1 127 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 NCK2O43639 380 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 STX6O43752 255 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 KRT18P05783 430 aaKnown RBP12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 CYP11B2P19099 503 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 SYT1P21579 422 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 PPM1AP35813 382 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 PTENP60484 403 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 FAM189BP81408 668 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 DMP1Q13316 513 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 MAPK6Q16659 721 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 LONRF3Q496Y0 759 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 SPRED2Q7Z698 418 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 CABP7Q86V35 215 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 C4orf32Q8N8J7 132 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 HELQQ8TDG4 1101 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 P2RX5Q93086 422 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 SNX21Q969T3 373 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 CCDC51Q96ER9 411 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 DRC1Q96MC2 740 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 NSUN3Q9H649 340 aaKnown RBP12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 TYW1Q9NV66 732 aaKnown RBP12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 PRMT7Q9NVM4 692 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 KANSL3Q9P2N6 904 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
ARHGEF39-204ENST00000488918 PHLPP2Q6ZVD8 1323 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 EYA4O95677 639 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 SRGAP2BP0DMP2 458 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 ITGA4P13612 1032 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 ARL2P36404 184 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 LONP1P36776 959 aaKnown RBP12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 GATMP50440 423 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 EFNA5P52803 228 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 SMTNP53814 917 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 CEBPZQ03701 1054 aaKnown RBP12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 CAPSQ13938 189 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 SF3A1Q15459 793 aaKnown RBP12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 KLHL23Q8NBE8 558 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 ZNF396Q96N95 335 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 TIPINQ9BVW5 301 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 NFKBIZQ9BYH8 718 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 GBP3Q9H0R5 595 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 ALG13Q9NP73 1137 aaKnown RBP12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 CCDC39Q9UFE4 941 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 FAM50BQ9Y247 325 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 GBF1Q92538 1859 aa12.39□□□□□ -0.43
ARHGEF39-204ENST00000488918 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 FSD2A1L4K1 749 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 PP2D1A8MPX8 630 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 E9PMD0 336 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 DLL1O00548 723 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 SLC26A4O43511 780 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 ZC3H11AO75152 810 aaKnown RBP eCLIP12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 GLRA2P23416 452 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 CDC25AP30304 524 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 NAMPTP43490 491 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 UBE3AQ05086 875 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 NOMO2Q5JPE7 1267 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 SLC27A1Q6PCB7 646 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 COLGALT1Q8NBJ5 622 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 CPB2Q96IY4 423 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 PRIMPOLQ96LW4 560 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 CASD1Q96PB1 797 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 PLIN2Q99541 437 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 TRAIPQ9BWF2 469 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 APOL6Q9BWW8 343 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 RSAD1Q9HA92 442 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 GPRC5CQ9NQ84 441 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 ENTPD7Q9NQZ7 604 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 SPG21Q9NZD8 308 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 PLAGL2Q9UPG8 496 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 EVPLQ92817 2033 aa12.38□□□□□ -0.43
ARHGEF39-204ENST00000488918 H0YCG3 227 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 RBAK-RBAKDNI3L0D1 243 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 K7ERI5 159 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 N4BP3O15049 544 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 TSPAN1O60635 241 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 FGF18O76093 207 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms