RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 KIF11P52732 1056 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 BCAR1P56945 870 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 ZC3H12BQ5HYM0 836 aaKnown RBP4.4□□□□□ -1.71
CCDC93-209ENST00000488908 METTL24Q5JXM2 366 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 PRAMEF9Q5VWM5 478 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 OTOP1Q7RTM1 612 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 CKAP2LQ8IYA6 745 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 NELL1Q92832 810 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 CPPED1Q9BRF8 314 aaPredicted RBP4.4□□□□□ -1.71
CCDC93-209ENST00000488908 HAPLN2Q9GZV7 340 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 CCDC113Q9H0I3 377 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 KCNH6Q9H252 994 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 R3HDMLQ9H3Y0 253 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 SERHL2Q9H4I8 314 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 ZNF768Q9H5H4 540 aaKnown RBP4.4□□□□□ -1.71
CCDC93-209ENST00000488908 SPATA31A6Q5VVP1 1343 aa4.4□□□□□ -1.71
CCDC93-209ENST00000488908 CCDC85CA6NKD9 419 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 NRP1O14786 923 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 MAFGO15525 162 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 KRT37O76014 449 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 ARHGAP44Q17R89 818 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 ERCC6LQ2NKX8 1250 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 TRIM61Q5EBN2 209 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 EPHA10Q5JZY3 1008 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 LCORLQ8N3X6 602 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 IGSF22Q8N9C0 903 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 GLB1L3Q8NCI6 653 aaPredicted RBP4.39□□□□□ -1.71
CCDC93-209ENST00000488908 TUBGCP5Q96RT8 1024 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 PDCD2LQ9BRP1 358 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 EPC1Q9H2F5 836 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 ACSS2Q9NR19 701 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 INSL6Q9Y581 213 aa4.39□□□□□ -1.71
CCDC93-209ENST00000488908 HOXA3O43365 443 aaPredicted RBP4.38□□□□□ -1.71
CCDC93-209ENST00000488908 LPXNO60711 386 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 MAN2A1Q16706 1144 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 FAM214AQ32MH5 1076 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 FBXO42Q6P3S6 717 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 CCDC62Q6P9F0 684 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 NME9Q86XW9 330 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 SCLYQ96I15 445 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 UIMC1Q96RL1 719 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 WDR11Q9BZH6 1224 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 PCIF1Q9H4Z3 704 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 RSAD1Q9HA92 442 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 ANKFY1Q9P2R3 1169 aa4.38□□□□□ -1.71
CCDC93-209ENST00000488908 TCRBV16S1A1N1A0A5B0 115 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 TMEM200CA6NKL6 621 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 AHRRA9YTQ3 701 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 STK10O94804 968 aaKnown RBP4.37□□□□□ -1.71
CCDC93-209ENST00000488908 FSBPO95073 299 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 KCNA6P17658 529 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 ITGB6P18564 788 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 VPS72Q15906 364 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 PAPD7Q5XG87 772 aaKnown RBP4.37□□□□□ -1.71
CCDC93-209ENST00000488908 ABHD17CQ6PCB6 329 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 BHLHA9Q7RTU4 235 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 FAM83AQ86UY5 434 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 ARHGEF19Q8IW93 802 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 CMTR2Q8IYT2 770 aaKnown RBP4.37□□□□□ -1.71
CCDC93-209ENST00000488908 OR52N2Q8NGI0 321 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 CAVIN3Q969G5 261 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 COQ10AQ96MF6 247 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 DCLRE1CQ96SD1 692 aaKnown RBP4.37□□□□□ -1.71
CCDC93-209ENST00000488908 NDC1Q9BTX1 674 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 OSBPL6Q9BZF3 934 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 TRPM5Q9NZQ8 1165 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.37□□□□□ -1.71
CCDC93-209ENST00000488908 KDM2BQ8NHM5 1336 aa4.37□□□□□ -1.71
CCDC93-209ENST00000488908 GAGE12BA1L429 117 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 GAGE12HA6NDE8 117 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 RNASET2O00584 256 aaKnown RBP4.36□□□□□ -1.71
CCDC93-209ENST00000488908 DNAJC6O75061 913 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 CYP17A1P05093 508 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 TYRP1P17643 537 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 FAM189BP81408 668 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 PRR16Q569H4 304 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 GDF7Q7Z4P5 450 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 HDGFL2Q7Z4V5 671 aaPredicted RBP4.36□□□□□ -1.71
CCDC93-209ENST00000488908 BRAPQ7Z569 592 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 LILRA3Q8N6C8 439 aaPredicted RBP4.36□□□□□ -1.71
CCDC93-209ENST00000488908 CPEB1Q9BZB8 566 aaKnown RBP4.36□□□□□ -1.71
CCDC93-209ENST00000488908 PITHD1Q9GZP4 211 aaPredicted RBP4.36□□□□□ -1.71
CCDC93-209ENST00000488908 PRDM13Q9H4Q3 707 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 SYBUQ9NX95 663 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 HDAC5Q9UQL6 1122 aa4.36□□□□□ -1.71
CCDC93-209ENST00000488908 A0A0A6YYJ9 748 aa4.35□□□□□ -1.71
CCDC93-209ENST00000488908 NCR1O76036 304 aa4.35□□□□□ -1.71
CCDC93-209ENST00000488908 HKR1P10072 659 aa4.35□□□□□ -1.71
CCDC93-209ENST00000488908 APOBEC3AP31941 199 aaPredicted RBP4.35□□□□□ -1.71
CCDC93-209ENST00000488908 MECP2P51608 486 aaKnown RBP4.35□□□□□ -1.71
CCDC93-209ENST00000488908 ELLP55199 621 aaPredicted RBP4.35□□□□□ -1.71
CCDC93-209ENST00000488908 MYBPC3Q14896 1274 aa4.35□□□□□ -1.71
CCDC93-209ENST00000488908 LRP10Q7Z4F1 713 aa4.35□□□□□ -1.71
CCDC93-209ENST00000488908 OR5M3Q8NGP4 307 aa4.35□□□□□ -1.71
CCDC93-209ENST00000488908 ENKD1Q9H0I2 346 aa4.35□□□□□ -1.71
CCDC93-209ENST00000488908 AKIP1Q9NQ31 210 aa4.35□□□□□ -1.71
CCDC93-209ENST00000488908 ING3Q9NXR8 418 aa4.35□□□□□ -1.71
CCDC93-209ENST00000488908 TNPO3Q9Y5L0 923 aaKnown RBP4.35□□□□□ -1.71
CCDC93-209ENST00000488908 EPN1Q9Y6I3 576 aaPredicted RBP4.35□□□□□ -1.71
CCDC93-209ENST00000488908 DVL2O14641 736 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms