RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 MYMKA6NI61 221 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 RSPH10B2B2RC85 870 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 UQCRHP07919 91 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 IQCF3P0C7M6 154 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 SLFN14P0C7P3 912 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 PRR29P0C7W0 189 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 RSPH10BP0C881 870 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 BMP6P22004 513 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 GPC3P51654 580 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 NLRP11P59045 1033 aaKnown RBP21.35■■□□□ 1.01
CCM2-216ENST00000488727 CT47A1Q5JQC4 288 aaPredicted RBP21.35■■□□□ 1.01
CCM2-216ENST00000488727 ISM2Q6H9L7 571 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 BSNDQ8WZ55 320 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 REEP2Q9BRK0 252 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 ADAMTS10Q9H324 1103 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 COL4A3BPQ9Y5P4 624 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 CBFA2T2O43439 604 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 SMC2O95347 1197 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 GLRA2P23416 452 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 FANCCQ00597 558 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 LAMTOR4Q0VGL1 99 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 GIT2Q14161 759 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 GPNMBQ14956 572 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 CELF4Q9BZC1 486 aaKnown RBP21.34■■□□□ 1.01
CCM2-216ENST00000488727 GINS2Q9Y248 185 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 TRPV2Q9Y5S1 764 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 NR2E3Q9Y5X4 410 aa21.34■■□□□ 1.01
CCM2-216ENST00000488727 PDE4DIPQ5VU43 2346 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 CCZ1BP86790 482 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 CCZ1P86791 482 aaPredicted RBP21.33■■□□□ 1.01
CCM2-216ENST00000488727 DYMQ7RTS9 669 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 GRAMD1CQ8IYS0 662 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 CCDC150Q8NCX0 1101 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 TET1Q8NFU7 2136 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 MYRIPQ8NFW9 859 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 TMEM40Q8WWA1 233 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 DDX12PQ92771 950 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 MAGEF1Q9HAY2 307 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 KCND1Q9NSA2 647 aa21.33■■□□□ 1.01
CCM2-216ENST00000488727 SFI1A8K8P3 1242 aa21.32■■□□□ 1
CCM2-216ENST00000488727 M0QZ92 97 aa21.32■■□□□ 1
CCM2-216ENST00000488727 MLLT1Q03111 559 aaPredicted RBP21.32■■□□□ 1
CCM2-216ENST00000488727 CAPSQ13938 189 aa21.32■■□□□ 1
CCM2-216ENST00000488727 MFSD5Q6N075 450 aa21.32■■□□□ 1
CCM2-216ENST00000488727 KIFAP3Q92845 792 aa21.32■■□□□ 1
CCM2-216ENST00000488727 BADQ92934 168 aa21.32■■□□□ 1
CCM2-216ENST00000488727 DNAJC19Q96DA6 116 aa21.32■■□□□ 1
CCM2-216ENST00000488727 NLRP4Q96MN2 994 aa21.32■■□□□ 1
CCM2-216ENST00000488727 OSMRQ99650 979 aa21.32■■□□□ 1
CCM2-216ENST00000488727 TIPINQ9BVW5 301 aa21.32■■□□□ 1
CCM2-216ENST00000488727 CEP290O15078 2479 aa21.32■■□□□ 1
CCM2-216ENST00000488727 A0A087WZ62 844 aa21.32■■□□□ 1
CCM2-216ENST00000488727 NBNO60934 754 aa21.32■■□□□ 1
CCM2-216ENST00000488727 CASP1P29466 404 aa21.32■■□□□ 1
CCM2-216ENST00000488727 AFMP43652 599 aa21.32■■□□□ 1
CCM2-216ENST00000488727 MXD4Q14582 209 aaPredicted RBP21.32■■□□□ 1
CCM2-216ENST00000488727 FILIP1Q7Z7B0 1213 aa21.32■■□□□ 1
CCM2-216ENST00000488727 VWCEQ96DN2 955 aa21.32■■□□□ 1
CCM2-216ENST00000488727 PAGE5Q96GU1 130 aa21.32■■□□□ 1
CCM2-216ENST00000488727 DRC1Q96MC2 740 aa21.32■■□□□ 1
CCM2-216ENST00000488727 FDXACB1Q9BRP7 624 aaPredicted RBP21.32■■□□□ 1
CCM2-216ENST00000488727 TRIM9Q9C026 710 aa21.32■■□□□ 1
CCM2-216ENST00000488727 IFT122Q9HBG6 1241 aa21.32■■□□□ 1
CCM2-216ENST00000488727 ODF2LQ9ULJ1 636 aa21.32■■□□□ 1
CCM2-216ENST00000488727 DYNC1I1O14576 645 aa21.31■■□□□ 1
CCM2-216ENST00000488727 KRT18P05783 430 aaKnown RBP21.31■■□□□ 1
CCM2-216ENST00000488727 SRGAP2CP0DJJ0 459 aa21.31■■□□□ 1
CCM2-216ENST00000488727 CSF2RAP15509 400 aa21.31■■□□□ 1
CCM2-216ENST00000488727 FBXO47Q5MNV8 452 aa21.31■■□□□ 1
CCM2-216ENST00000488727 RNF149Q8NC42 400 aa21.31■■□□□ 1
CCM2-216ENST00000488727 ENOX1Q8TC92 643 aaKnown RBP21.31■■□□□ 1
CCM2-216ENST00000488727 NLRP7Q8WX94 980 aa21.31■■□□□ 1
CCM2-216ENST00000488727 ASAP2O43150 1006 aa21.3■■□□□ 1
CCM2-216ENST00000488727 GTF2F1P35269 517 aaKnown RBP eCLIP21.3■■□□□ 11e-8■■■■■ 31.2
CCM2-216ENST00000488727 CRYBB1P53674 252 aaPredicted RBP21.3■■□□□ 1
CCM2-216ENST00000488727 ARID5BQ14865 1188 aa21.3■■□□□ 1
CCM2-216ENST00000488727 ZNF410Q86VK4 478 aa21.3■■□□□ 1
CCM2-216ENST00000488727 SCLT1Q96NL6 688 aa21.3■■□□□ 1
CCM2-216ENST00000488727 BLZF1Q9H2G9 400 aa21.3■■□□□ 1
CCM2-216ENST00000488727 CSDE1O75534 798 aaKnown RBP21.29■■□□□ 1
CCM2-216ENST00000488727 GHRP10912 638 aa21.29■■□□□ 1
CCM2-216ENST00000488727 ATP1A3P13637 1013 aa21.29■■□□□ 1
CCM2-216ENST00000488727 ERCC5P28715 1186 aaPredicted RBP21.29■■□□□ 1
CCM2-216ENST00000488727 ZNF131P52739 623 aa21.29■■□□□ 1
CCM2-216ENST00000488727 CDC42EP1Q00587 391 aa21.29■■□□□ 1
CCM2-216ENST00000488727 LPIN1Q14693 890 aa21.29■■□□□ 1
CCM2-216ENST00000488727 TMC6Q7Z403 805 aa21.29■■□□□ 1
CCM2-216ENST00000488727 ZNF710Q8N1W2 664 aa21.29■■□□□ 1
CCM2-216ENST00000488727 TMEM199Q8N511 208 aa21.29■■□□□ 1
CCM2-216ENST00000488727 ADGRA3Q8IWK6 1321 aa21.29■■□□□ 1
CCM2-216ENST00000488727 H0YGN5 161 aa21.29■■□□□ 1
CCM2-216ENST00000488727 SKILP12757 684 aa21.29■■□□□ 1
CCM2-216ENST00000488727 KCNJ6P48051 423 aa21.29■■□□□ 1
CCM2-216ENST00000488727 PEX3P56589 373 aa21.29■■□□□ 1
CCM2-216ENST00000488727 AMPD3Q01432 767 aa21.29■■□□□ 1
CCM2-216ENST00000488727 CUL4BQ13620 913 aa21.29■■□□□ 1
CCM2-216ENST00000488727 C7orf25Q9BPX7 421 aa21.29■■□□□ 1
CCM2-216ENST00000488727 KIFC3Q9BVG8 833 aa21.29■■□□□ 1
CCM2-216ENST00000488727 MINDY3Q9H8M7 445 aa21.29■■□□□ 1
CCM2-216ENST00000488727 AGO3Q9H9G7 860 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms