RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CABP7Q86V35 215 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 C12orf76Q8N812 135 aaPredicted RBP21.4■■□□□ 1.02
GGPS1-206ENST00000488594 PGBD4Q96DM1 585 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 NRDE2Q9H7Z3 1164 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 LIMD1Q9UGP4 676 aa21.4■■□□□ 1.02
GGPS1-206ENST00000488594 MAFO75444 373 aaPredicted RBP21.39■■□□□ 1.02
GGPS1-206ENST00000488594 STBD1O95210 358 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 WEE2P0C1S8 567 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 ASTLQ6HA08 431 aaPredicted RBP21.39■■□□□ 1.02
GGPS1-206ENST00000488594 CENPQQ7L2Z9 268 aaPredicted RBP21.39■■□□□ 1.02
GGPS1-206ENST00000488594 RHPN2Q8IUC4 686 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 TRIM22Q8IYM9 498 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 TMEM105Q8N8V8 129 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 AUTS2Q8WXX7 1259 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 LPPQ93052 612 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 GJA10Q969M2 543 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 MFSD1Q9H3U5 465 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 SFXN1Q9H9B4 322 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 PCDHA4Q9UN74 947 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 INPP5FQ9Y2H2 1132 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 SNX14Q9Y5W7 946 aa21.39■■□□□ 1.02
GGPS1-206ENST00000488594 OFD1O75665 1012 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 ASGR2P07307 311 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 PSMA5P28066 241 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 CLCN5P51795 746 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 EVCP57679 992 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 MOXD1Q6UVY6 613 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 CATSPER4Q7RTX7 472 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 URGCPQ8TCY9 931 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 ACSF2Q96CM8 615 aaPredicted RBP21.38■■□□□ 1.01
GGPS1-206ENST00000488594 NLRP4Q96MN2 994 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 EMILIN2Q9BXX0 1053 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 CYP26B1Q9NR63 512 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 USP34Q70CQ2 3546 aa21.38■■□□□ 1.01
GGPS1-206ENST00000488594 TMEM150BA6NC51 233 aa21.37■■□□□ 1.01
GGPS1-206ENST00000488594 DDX11L8A8MPP1 907 aa21.37■■□□□ 1.01
GGPS1-206ENST00000488594 PDIA3P30101 505 aaKnown RBP21.37■■□□□ 1.01
GGPS1-206ENST00000488594 PSMC5P62195 406 aa21.37■■□□□ 1.01
GGPS1-206ENST00000488594 PTPN14Q15678 1187 aa21.37■■□□□ 1.01
GGPS1-206ENST00000488594 TMC5Q6UXY8 1006 aa21.37■■□□□ 1.01
GGPS1-206ENST00000488594 OTOP3Q7RTS5 596 aa21.37■■□□□ 1.01
GGPS1-206ENST00000488594 FAM177A1Q8N128 213 aaPredicted RBP21.37■■□□□ 1.01
GGPS1-206ENST00000488594 BCL7CQ8WUZ0 217 aaPredicted RBP21.37■■□□□ 1.01
GGPS1-206ENST00000488594 SMOC2Q9H3U7 446 aa21.37■■□□□ 1.01
GGPS1-206ENST00000488594 ZFHX2Q9C0A1 2572 aaPredicted RBP21.37■■□□□ 1.01
GGPS1-206ENST00000488594 SPDYE4A6NLX3 237 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 TDP2O95551 362 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 NBL1P41271 181 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 SLC11A1P49279 550 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 CCT2P78371 535 aaKnown RBP21.36■■□□□ 1.01
GGPS1-206ENST00000488594 LONRF3Q496Y0 759 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 GALNT17Q6IS24 598 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 CCDC149Q6ZUS6 474 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 GPR149Q86SP6 731 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 EXOC8Q8IYI6 725 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 ETNPPLQ8TBG4 499 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 SLC7A3Q8WY07 619 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 MBOAT7Q96N66 472 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 SH2D3AQ9BRG2 576 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 GBP3Q9H0R5 595 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 AGPAT5Q9NUQ2 364 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 KANSL3Q9P2N6 904 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 PCDHB2Q9Y5E7 798 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 WDR81Q562E7 1941 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 MEIS3P2A8K0S8 358 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 DKC1O60832 514 aaKnown RBP eCLIP21.36■■□□□ 1.01
GGPS1-206ENST00000488594 KANK3Q6NY19 840 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 ANO5Q75V66 913 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 SKAP1Q86WV1 359 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 TMEM175Q9BSA9 504 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 IFT122Q9HBG6 1241 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 NCOA5Q9HCD5 579 aaKnown RBP21.36■■□□□ 1.01
GGPS1-206ENST00000488594 DNAJB4Q9UDY4 337 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 PPME1Q9Y570 386 aa21.36■■□□□ 1.01
GGPS1-206ENST00000488594 CNTNAP2Q9UHC6 1331 aa21.35■■□□□ 1.01
GGPS1-206ENST00000488594 KLRC2P26717 231 aa21.35■■□□□ 1.01
GGPS1-206ENST00000488594 SSRP1Q08945 709 aaKnown RBP21.35■■□□□ 1.01
GGPS1-206ENST00000488594 C15orf39Q6ZRI6 1047 aa21.35■■□□□ 1.01
GGPS1-206ENST00000488594 KSR1Q8IVT5 923 aa21.35■■□□□ 1.01
GGPS1-206ENST00000488594 BLIDQ8IZY5 108 aa21.35■■□□□ 1.01
GGPS1-206ENST00000488594 DAGLBQ8NCG7 672 aa21.35■■□□□ 1.01
GGPS1-206ENST00000488594 KLHL5Q96PQ7 755 aa21.35■■□□□ 1.01
GGPS1-206ENST00000488594 FAM193BQ96PV7 902 aaPredicted RBP21.35■■□□□ 1.01
GGPS1-206ENST00000488594 VN1R3Q9BXE9 311 aa21.35■■□□□ 1.01
GGPS1-206ENST00000488594 MRPL17Q9NRX2 175 aaKnown RBP21.35■■□□□ 1.01
GGPS1-206ENST00000488594 DDX25Q9UHL0 483 aaKnown RBP21.35■■□□□ 1.01
GGPS1-206ENST00000488594 COL4A3BPQ9Y5P4 624 aa21.35■■□□□ 1.01
GGPS1-206ENST00000488594 M0R2N6 131 aa21.34■■□□□ 1.01
GGPS1-206ENST00000488594 DEXIO95424 95 aa21.34■■□□□ 1.01
GGPS1-206ENST00000488594 ALDH2P05091 517 aa21.34■■□□□ 1.01
GGPS1-206ENST00000488594 QARSP47897 775 aaKnown RBP21.34■■□□□ 1.01
GGPS1-206ENST00000488594 CLCN4P51793 760 aa21.34■■□□□ 1.01
GGPS1-206ENST00000488594 TDGQ13569 410 aa21.34■■□□□ 1.01
GGPS1-206ENST00000488594 NONOQ15233 471 aaKnown RBP eCLIP21.34■■□□□ 1.01
GGPS1-206ENST00000488594 AGMOQ6ZNB7 445 aa21.34■■□□□ 1.01
GGPS1-206ENST00000488594 SRGAP1Q7Z6B7 1085 aa21.34■■□□□ 1.01
GGPS1-206ENST00000488594 MRPL10Q7Z7H8 261 aaKnown RBP21.34■■□□□ 1.01
GGPS1-206ENST00000488594 ZNF280BQ86YH2 543 aa21.34■■□□□ 1.01
GGPS1-206ENST00000488594 RSAD1Q9HA92 442 aa21.34■■□□□ 1.01
GGPS1-206ENST00000488594 CPLX1O14810 134 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms