RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 XRCC6P12956 609 aaKnown RBP eCLIP25.75■■□□□ 1.71
CUL4A-209ENST00000488558 MCM7P33993 719 aa25.75■■□□□ 1.71
CUL4A-209ENST00000488558 DLX2Q07687 328 aaPredicted RBP25.75■■□□□ 1.71
CUL4A-209ENST00000488558 MXD4Q14582 209 aaPredicted RBP25.75■■□□□ 1.71
CUL4A-209ENST00000488558 RABEP1Q15276 862 aa25.75■■□□□ 1.71
CUL4A-209ENST00000488558 FAM184AQ8NB25 1140 aa25.75■■□□□ 1.71
CUL4A-209ENST00000488558 CDCA3Q99618 268 aaPredicted RBP25.75■■□□□ 1.71
CUL4A-209ENST00000488558 C1QTNF1Q9BXJ1 281 aa25.75■■□□□ 1.71
CUL4A-209ENST00000488558 BMP2KQ9NSY1 1161 aaPredicted RBP25.75■■□□□ 1.71
CUL4A-209ENST00000488558 PUF60Q9UHX1 559 aaKnown RBP25.75■■□□□ 1.71
CUL4A-209ENST00000488558 POTEMA6NI47 508 aa25.74■■□□□ 1.71
CUL4A-209ENST00000488558 LINC01565O15544 149 aa25.74■■□□□ 1.71
CUL4A-209ENST00000488558 SRGAP2CP0DJJ0 459 aa25.74■■□□□ 1.71
CUL4A-209ENST00000488558 NRIP1P48552 1158 aa25.74■■□□□ 1.71
CUL4A-209ENST00000488558 TRAPPC10P48553 1259 aa25.74■■□□□ 1.71
CUL4A-209ENST00000488558 POU5F1BQ06416 359 aa25.74■■□□□ 1.71
CUL4A-209ENST00000488558 SMAD4Q13485 552 aaKnown RBP25.74■■□□□ 1.71
CUL4A-209ENST00000488558 GJD3Q8N144 294 aa25.74■■□□□ 1.71
CUL4A-209ENST00000488558 MSLNLQ96KJ4 702 aa25.74■■□□□ 1.71
CUL4A-209ENST00000488558 CCDC43Q96MW1 224 aaKnown RBP25.74■■□□□ 1.71
CUL4A-209ENST00000488558 RARRES1P49788 294 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 NDUFV1P49821 464 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 ERVFC1P60507 584 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 SMAD2Q15796 467 aaKnown RBP25.73■■□□□ 1.71
CUL4A-209ENST00000488558 GLB1LQ6UWU2 654 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 IFNLR1Q8IU57 520 aaPredicted RBP25.73■■□□□ 1.71
CUL4A-209ENST00000488558 NOSTRINQ8IVI9 506 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 RNF149Q8NC42 400 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 MICAL1Q8TDZ2 1067 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 PGBD4Q96DM1 585 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 MINDY3Q9H8M7 445 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 TUFT1Q9NNX1 390 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 CD320Q9NPF0 282 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 SPG21Q9NZD8 308 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 CD207Q9UJ71 328 aa25.73■■□□□ 1.71
CUL4A-209ENST00000488558 MBTPS2O43462 519 aa25.72■■□□□ 1.71
CUL4A-209ENST00000488558 OR52Z1P0C646 297 aa25.72■■□□□ 1.71
CUL4A-209ENST00000488558 ATP2B1P20020 1258 aa25.72■■□□□ 1.71
CUL4A-209ENST00000488558 KRT17Q04695 432 aa25.72■■□□□ 1.71
CUL4A-209ENST00000488558 TFDP1Q14186 410 aa25.72■■□□□ 1.71
CUL4A-209ENST00000488558 SLC39A11Q8N1S5 342 aa25.72■■□□□ 1.71
CUL4A-209ENST00000488558 TLE6Q9H808 572 aa25.72■■□□□ 1.71
CUL4A-209ENST00000488558 NGRNQ9NPE2 291 aaKnown RBP25.72■■□□□ 1.71
CUL4A-209ENST00000488558 PCDHGC5Q9Y5F6 944 aa25.72■■□□□ 1.71
CUL4A-209ENST00000488558 EYA4O95677 639 aa25.71■■□□□ 1.71
CUL4A-209ENST00000488558 SPATA31C1P0DKV0 1188 aa25.71■■□□□ 1.71
CUL4A-209ENST00000488558 PTENP60484 403 aa25.71■■□□□ 1.71
CUL4A-209ENST00000488558 COASYQ13057 564 aa25.71■■□□□ 1.71
CUL4A-209ENST00000488558 DUSP6Q16828 381 aa25.71■■□□□ 1.71
CUL4A-209ENST00000488558 POLR3CQ9BUI4 534 aaPredicted RBP25.71■■□□□ 1.71
CUL4A-209ENST00000488558 NFKBIZQ9BYH8 718 aa25.71■■□□□ 1.71
CUL4A-209ENST00000488558 CLEC1BQ9P126 229 aa25.71■■□□□ 1.71
CUL4A-209ENST00000488558 PCDHB2Q9Y5E7 798 aa25.71■■□□□ 1.71
CUL4A-209ENST00000488558 CNTNAP2Q9UHC6 1331 aa25.7■■□□□ 1.71
CUL4A-209ENST00000488558 ST18O60284 1047 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 GLP2RO95838 553 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 AXLP30530 894 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 HOXA11P31270 313 aaPredicted RBP25.7■■□□□ 1.7
CUL4A-209ENST00000488558 ARL2P36404 184 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 PBX3P40426 434 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 ZP2Q05996 745 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 GNL2Q13823 731 aaKnown RBP25.7■■□□□ 1.7
CUL4A-209ENST00000488558 NOMO2Q5JPE7 1267 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 TTC38Q5R3I4 469 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 MRPL10Q7Z7H8 261 aaKnown RBP25.7■■□□□ 1.7
CUL4A-209ENST00000488558 RBM23Q86U06 439 aaKnown RBP25.7■■□□□ 1.7
CUL4A-209ENST00000488558 ADHFE1Q8IWW8 467 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 LPPQ93052 612 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 CCDC51Q96ER9 411 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 TCF25Q9BQ70 676 aa25.7■■□□□ 1.7
CUL4A-209ENST00000488558 DBR1Q9UK59 544 aaKnown RBP25.7■■□□□ 1.7
CUL4A-209ENST00000488558 NOL7Q9UMY1 257 aaKnown RBP25.7■■□□□ 1.7
CUL4A-209ENST00000488558 ERLIN2O94905 339 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 U2AF2P26368 475 aaKnown RBP eCLIP25.69■■□□□ 1.72e-7■■■■■ 33.3
CUL4A-209ENST00000488558 ALDH7A1P49419 539 aaKnown RBP25.69■■□□□ 1.7
CUL4A-209ENST00000488558 BCAR1P56945 870 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 CAPSQ13938 189 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 CLUL1Q15846 466 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 UBXN11Q5T124 520 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 CATSPER3Q86XQ3 398 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 SMRP1Q8NCR6 262 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 CNNM3Q8NE01 707 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 ERMNQ8TAM6 284 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 PIGOQ8TEQ8 1089 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 POP1Q99575 1024 aaKnown RBP25.69■■□□□ 1.7
CUL4A-209ENST00000488558 ENTPD7Q9NQZ7 604 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 TBC1D13Q9NVG8 400 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 KIF3AQ9Y496 699 aa25.69■■□□□ 1.7
CUL4A-209ENST00000488558 C19orf67A6NJJ6 358 aa25.68■■□□□ 1.7
CUL4A-209ENST00000488558 OFD1O75665 1012 aa25.68■■□□□ 1.7
CUL4A-209ENST00000488558 MUTP22033 750 aa25.68■■□□□ 1.7
CUL4A-209ENST00000488558 RPA1P27694 616 aa25.68■■□□□ 1.7
CUL4A-209ENST00000488558 SSTR3P32745 418 aaPredicted RBP25.68■■□□□ 1.7
CUL4A-209ENST00000488558 ZNF174Q15697 407 aa25.68■■□□□ 1.7
CUL4A-209ENST00000488558 PLPP4Q5VZY2 271 aa25.68■■□□□ 1.7
CUL4A-209ENST00000488558 ASAP3Q8TDY4 903 aa25.68■■□□□ 1.7
CUL4A-209ENST00000488558 KHSRPQ92945 711 aaKnown RBP eCLIP25.68■■□□□ 1.75e-7■■■■□ 20.3
CUL4A-209ENST00000488558 NACC1Q96RE7 527 aa25.68■■□□□ 1.7
CUL4A-209ENST00000488558 MEIS3P2A8K0S8 358 aa25.67■■□□□ 1.7
CUL4A-209ENST00000488558 PI4K2BG5E9Z4 385 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms