RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 SMARCA1P28370 1054 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 PRKCQQ04759 706 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 MEI1Q5TIA1 1274 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 SYNE4Q8N205 404 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 KBTBD13C9JR72 458 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 PDCLQ13371 301 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 CUL1Q13616 776 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 EFHC2Q5JST6 749 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 HEATR6Q6AI08 1181 aaKnown RBP16.32■□□□□ 0.2
PKD1-220ENST00000487932 PPM1NQ8N819 430 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 SSH3Q8TE77 659 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 ZFP42Q96MM3 310 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 CFAP65Q6ZU64 1925 aaKnown RBP16.32■□□□□ 0.2
PKD1-220ENST00000487932 TADA2AO75478 443 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 SDC4P31431 198 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 SPP2Q13103 211 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 RFX8Q6ZV50 586 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 WDR75Q8IWA0 830 aaKnown RBP16.32■□□□□ 0.2
PKD1-220ENST00000487932 OTUB1Q96FW1 271 aaPredicted RBP16.32■□□□□ 0.2
PKD1-220ENST00000487932 SMAD5Q99717 465 aaKnown RBP16.32■□□□□ 0.2
PKD1-220ENST00000487932 FEM1BQ9UK73 627 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 CIAO1O76071 339 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 CHMP1BQ7LBR1 199 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 PPP2R3CQ969Q6 453 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 MTBPQ96DY7 904 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 PAGE5Q96GU1 130 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 TMEM161AQ9NX61 479 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 KRT87PA6NCN2 255 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 FAM47EQ6ZV65 393 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 RNF146Q9NTX7 359 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 NUP160Q12769 1436 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 H0Y3Z8 333 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 ZNF197O14709 1029 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 PADI6Q6TGC4 694 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 C11orf57Q6ZUT1 292 aaPredicted RBP16.31■□□□□ 0.2
PKD1-220ENST00000487932 FOXP4Q8IVH2 680 aaPredicted RBP16.31■□□□□ 0.2
PKD1-220ENST00000487932 BTBD6Q96KE9 485 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 ELAC2Q9BQ52 826 aaKnown RBP16.31■□□□□ 0.2
PKD1-220ENST00000487932 RNF103-CHMP3A0A140T963 221 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 CCDC78A2IDD5 438 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 CHRNA3P32297 505 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 MDM2Q00987 491 aaPredicted RBP16.31■□□□□ 0.2
PKD1-220ENST00000487932 ALCAMQ13740 583 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 OR9Q1Q8NGQ5 310 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 PHF21AQ96BD5 680 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 ADAMTS1Q9UHI8 967 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 LRRC53A6NM62 1247 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 hCG_1984214I3L0E3 225 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 IPO5O00410 1097 aaKnown RBP16.31■□□□□ 0.2
PKD1-220ENST00000487932 LMNAP02545 664 aaKnown RBP16.31■□□□□ 0.2
PKD1-220ENST00000487932 EPB42P16452 691 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 SOX11P35716 441 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 ZNF713Q8N859 430 aaPredicted RBP16.31■□□□□ 0.2
PKD1-220ENST00000487932 TMEM35BQ8NCS4 154 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 KDM4CQ9H3R0 1056 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 NDST4Q9H3R1 872 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 ELP3Q9H9T3 547 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 PIN4Q9Y237 131 aaKnown RBP16.31■□□□□ 0.2
PKD1-220ENST00000487932 ITSN2Q9NZM3 1697 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 PIK3C2GO75747 1445 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 OCA2Q04671 838 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 FSCBQ5H9T9 825 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 THAP9Q9H5L6 903 aa16.31■□□□□ 0.2
PKD1-220ENST00000487932 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L6PQ6QN14 398 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 PITPNM3Q9BZ71 974 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 STAP1Q9ULZ2 295 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 NFU1Q9UMS0 254 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 SNX24Q9Y343 169 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 POTEMA6NI47 508 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 PRRG1O14668 218 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 IKBKBO14920 756 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 MEFVO15553 781 aaPredicted RBP16.3■□□□□ 0.2
PKD1-220ENST00000487932 HSPA1AP0DMV8 641 aaKnown RBP16.3■□□□□ 0.2
PKD1-220ENST00000487932 HSPA1BP0DMV9 641 aaKnown RBP16.3■□□□□ 0.2
PKD1-220ENST00000487932 DMC1Q14565 340 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 LRRC8EQ6NSJ5 796 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 SFR1Q86XK3 245 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 VMP1Q96GC9 406 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 AIFM3Q96NN9 605 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 SH2B2O14492 632 aaPredicted RBP16.3■□□□□ 0.2
PKD1-220ENST00000487932 KIZQ2M2Z5 673 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 KHDRBS2Q5VWX1 349 aaKnown RBP16.3■□□□□ 0.2
PKD1-220ENST00000487932 TBC1D19Q8N5T2 526 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 PYCARDQ9ULZ3 195 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 GYG2O15488 501 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 GNA15P30679 374 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 SUSD4Q5VX71 490 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 MAGEB10Q96LZ2 347 aaPredicted RBP16.3■□□□□ 0.2
PKD1-220ENST00000487932 SEPT5Q99719 369 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms