RNA–Protein interactions for RNA: ENST00000487241.1

TRIM5-210, Transcript of tripartite motif containing 5, humanhuman

TSL 1 (best)

Gene TRIM5, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5-210ENST00000487241 DLX2Q07687 328 aaPredicted RBP8.84□□□□□ -0.99
TRIM5-210ENST00000487241 HYAL1Q12794 435 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 UGCGQ16739 394 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 LETM2Q2VYF4 491 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 PAN2Q504Q3 1202 aaKnown RBP8.84□□□□□ -0.99
TRIM5-210ENST00000487241 SPOUT1Q5T280 376 aaKnown RBP8.84□□□□□ -0.99
TRIM5-210ENST00000487241 EFCAB12Q6NXP0 572 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 FAM43BQ6ZT52 329 aaPredicted RBP8.84□□□□□ -0.99
TRIM5-210ENST00000487241 HFE2Q6ZVN8 426 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 CMTR2Q8IYT2 770 aaKnown RBP8.84□□□□□ -0.99
TRIM5-210ENST00000487241 LRRC71Q8N4P6 559 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 RDM1Q8NG50 284 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 MICAL1Q8TDZ2 1067 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 TMEM40Q8WWA1 233 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 WASF1Q92558 559 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 CLP1Q92989 425 aaKnown RBP8.84□□□□□ -0.99
TRIM5-210ENST00000487241 ADAM2Q99965 735 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 KCNH6Q9H252 994 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 ORC3Q9UBD5 711 aaPredicted RBP8.84□□□□□ -0.99
TRIM5-210ENST00000487241 DDX25Q9UHL0 483 aaKnown RBP8.84□□□□□ -0.99
TRIM5-210ENST00000487241 MUTYHQ9UIF7 546 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 ST3GAL5Q9UNP4 418 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 PCDHB7Q9Y5E2 793 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 PCDHB3Q9Y5E6 796 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 KIAA1671Q9BY89 1806 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 CACNA1GO43497 2377 aa8.84□□□□□ -0.99
TRIM5-210ENST00000487241 LINC01565O15544 149 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 MGEA5O60502 916 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 CCNT1O60563 726 aaKnown RBP8.83□□□□□ -1
TRIM5-210ENST00000487241 DTNBO60941 627 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 GPR32O75388 356 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 CTDNEP1O95476 244 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 LINC00271P0C7V0 271 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 LTBRP36941 435 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 NLRP11P59045 1033 aaKnown RBP8.83□□□□□ -1
TRIM5-210ENST00000487241 TBC1D8BQ0IIM8 1120 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 SMAD4Q13485 552 aaKnown RBP8.83□□□□□ -1
TRIM5-210ENST00000487241 SMAD2Q15796 467 aaKnown RBP8.83□□□□□ -1
TRIM5-210ENST00000487241 XKR3Q5GH77 459 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 PIK3AP1Q6ZUJ8 805 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 SLC24A5Q71RS6 500 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 NEK8Q86SG6 692 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 RBM23Q86U06 439 aaKnown RBP8.83□□□□□ -1
TRIM5-210ENST00000487241 FAM228AQ86W67 206 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 SCUBE3Q8IX30 993 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 CRIPAKQ8N1N5 446 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 NECAB1Q8N987 351 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 ETNPPLQ8TBG4 499 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 MBOAT7Q96N66 472 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 SCLT1Q96NL6 688 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 PLVAPQ9BX97 442 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 BRMS1Q9HCU9 246 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 RGS18Q9NS28 235 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 C1orf112Q9NSG2 853 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 GJB4Q9NTQ9 266 aa8.83□□□□□ -1
TRIM5-210ENST00000487241 MRPL42Q9Y6G3 142 aaKnown RBP8.83□□□□□ -1
TRIM5-210ENST00000487241 ATG2AQ2TAZ0 1938 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 SLC37A4O43826 429 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 MARCH6O60337 910 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 MMP1P03956 469 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 GCFC2P16383 781 aaKnown RBP8.82□□□□□ -1
TRIM5-210ENST00000487241 ZSCAN20P17040 1043 aaPredicted RBP8.82□□□□□ -1
TRIM5-210ENST00000487241 EIF4BP23588 611 aaKnown RBP8.82□□□□□ -1
TRIM5-210ENST00000487241 KRT2P35908 639 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 GATMP50440 423 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 GPC3P51654 580 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 NEK4P51957 841 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 ADAM15Q13444 863 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 COL19A1Q14993 1142 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 ME3Q16798 604 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 CTC1Q2NKJ3 1217 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 MTERF2Q49AM1 385 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 NAALADL2Q58DX5 795 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 PPP4R3AQ6IN85 833 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 B3GNT9Q6UX72 402 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 LINC01465Q8N7H1 131 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 KLHL23Q8NBE8 558 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 P2RX5Q93086 422 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 GTF3C6Q969F1 213 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 PBXIP1Q96AQ6 731 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 ZNF668Q96K58 619 aaPredicted RBP8.82□□□□□ -1
TRIM5-210ENST00000487241 FAM20AQ96MK3 541 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 NAP1L4Q99733 375 aaKnown RBP8.82□□□□□ -1
TRIM5-210ENST00000487241 TLE6Q9H808 572 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 PLAGL2Q9UPG8 496 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 FNDC1Q4ZHG4 1894 aaPredicted RBP8.82□□□□□ -1
TRIM5-210ENST00000487241 MYO7AQ13402 2215 aa8.82□□□□□ -1
TRIM5-210ENST00000487241 TMEM150BA6NC51 233 aa8.81□□□□□ -1
TRIM5-210ENST00000487241 TBKBP1A7MCY6 615 aa8.81□□□□□ -1
TRIM5-210ENST00000487241 C9IYK1 514 aa8.81□□□□□ -1
TRIM5-210ENST00000487241 DKC1O60832 514 aaKnown RBP eCLIP8.81□□□□□ -1
TRIM5-210ENST00000487241 TBX10O75333 385 aa8.81□□□□□ -1
TRIM5-210ENST00000487241 LARGE1O95461 756 aa8.81□□□□□ -1
TRIM5-210ENST00000487241 FDPSP14324 419 aaKnown RBP8.81□□□□□ -1
TRIM5-210ENST00000487241 DEKP35659 375 aaKnown RBP8.81□□□□□ -1
TRIM5-210ENST00000487241 NRIP1P48552 1158 aa8.81□□□□□ -1
TRIM5-210ENST00000487241 DNM2P50570 870 aa8.81□□□□□ -1
TRIM5-210ENST00000487241 PSMC5P62195 406 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms