RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PRKD1Q15139 912 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 GPR19Q15760 415 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 USP39Q53GS9 565 aaKnown RBP5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 CRB2Q5IJ48 1285 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 LRSAM1Q6UWE0 723 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 MAMDC4Q6UXC1 1216 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 EXOC2Q96KP1 924 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 ZDHHC5Q9C0B5 715 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 KIAA1683Q9H0B3 1180 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 SLITRK6Q9H5Y7 841 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 SMURF1Q9HCE7 757 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 RIC8BQ9NVN3 520 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 HECAQ9UBI9 543 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 OAZ3Q9UMX2 235 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 R3HCC1Q9Y3T6 440 aaKnown RBP5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 AATKQ6ZMQ8 1374 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 CRB1P82279 1406 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 COL5A2P05997 1499 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 RGPD3A6NKT7 1758 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 COL18A1P39060 1754 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 RGPD4Q7Z3J3 1758 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 KAT6BQ8WYB5 2073 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 OVOS2A0A0G2JMS6 1433 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 OVOS2A0A0J9YW53 1432 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 ZNF561-AS1K7EIQ3 104 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 ARVCFO00192 962 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 KCNQ2O43526 872 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 DIAPH1O60610 1272 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 ACO1P21399 889 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 COMTP21964 271 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 USP6P35125 1406 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 ADCY8P40145 1251 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 RAC3P60763 192 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 PAK1Q13153 545 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 STILQ15468 1287 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 DDB1Q16531 1140 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 OVOS2Q6IE36 1432 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 IL17DQ8TAD2 202 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 PLA2G12BQ9BX93 195 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 ZNF341Q9BYN7 854 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 QRICH2Q9H0J4 1663 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 PEAK1Q9H792 1746 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 SPON1Q9HCB6 807 aa5.61□□□□□ -1.51
SNRNP40-205ENST00000486941 RGPD5Q99666 1765 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 SLIT3O75094 1523 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 BCL9O00512 1426 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 EVC2Q86UK5 1308 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 WDR17Q8IZU2 1322 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 CR2P20023 1033 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 AOAHP28039 575 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 ETV4P43268 484 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 NRN1LQ496H8 165 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 TOM1L2Q6ZVM7 507 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 ARHGEF25Q86VW2 580 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 IFNL2Q8IZJ0 200 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 LRRC47Q8N1G4 583 aaKnown RBP5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 KCNH5Q8NCM2 988 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 ALG1Q9BT22 464 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 CDC42EP3Q9UKI2 254 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 NUB1Q9Y5A7 615 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 PCDHA9Q9Y5H5 950 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 SLC30A1Q9Y6M5 507 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 AKAP12Q02952 1782 aa5.6□□□□□ -1.51
SNRNP40-205ENST00000486941 PIK3C2AO00443 1686 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 LRRC37A3O60309 1634 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 NINLQ9Y2I6 1382 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 TTC21BQ7Z4L5 1316 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 TTC21AQ8NDW8 1320 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 CUTAO60888 179 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 C1SP09871 688 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 FAM153BP0C7A2 387 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 SRGAP2CP0DJJ0 459 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 KRT15P19012 456 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 PTGS1P23219 599 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 YY1P25490 414 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 FOXL1Q12952 345 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 NFYCQ13952 458 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 FNDC7Q5VTL7 733 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 KANK2Q63ZY3 851 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 TRIM68Q6AZZ1 485 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 C16orf59Q7L2K0 433 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 SCUBE1Q8IWY4 988 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 GPR135Q8IZ08 494 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 ZNF808Q8N4W9 903 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 PTPRN2Q92932 1015 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 FBXW5Q969U6 566 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 ZNF669Q96BR6 464 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 WNK4Q96J92 1243 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 AGO3Q9H9G7 860 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 GALNT8Q9NY28 637 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 PPP1R1BQ9UD71 204 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 PFDN2Q9UHV9 154 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 ATP23Q9Y6H3 246 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 WNK3Q9BYP7 1800 aa5.59□□□□□ -1.51
SNRNP40-205ENST00000486941 TRPM1Q7Z4N2 1603 aa5.59□□□□□ -1.52
SNRNP40-205ENST00000486941 RASSF10A6NK89 507 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 EXOC5O00471 708 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 CDC14BO60729 498 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 KCNQ1P51787 676 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms