RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 GTF2F1P35269 517 aaKnown RBP eCLIP12.7□□□□□ -0.388e-9■■■■□ 19.3
PRKCB-207ENST00000486868 FMO5P49326 533 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 ZNF157P51786 506 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-207ENST00000486868 EFNA5P52803 228 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 POU5F1BQ06416 359 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 ARHGAP1Q07960 439 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 CETN1Q12798 172 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 MXD4Q14582 209 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-207ENST00000486868 ZNF484Q5JVG2 852 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 MORN1Q5T089 497 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 KLHDC7AQ5VTJ3 777 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 SLFN12LQ6IEE8 588 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 DPP9Q86TI2 863 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 FBXO16Q8IX29 292 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-207ENST00000486868 MYRIPQ8NFW9 859 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 PPTC7Q8NI37 304 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 MAML3Q96JK9 1138 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 CHP1Q99653 195 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 HAUS4Q9H6D7 363 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 NHEJ1Q9H9Q4 299 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-207ENST00000486868 LRRC37A2A6NM11 1700 aa12.7□□□□□ -0.38
PRKCB-207ENST00000486868 COL1A2P08123 1366 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 ATP8B3O60423 1300 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 KIAA1217Q5T5P2 1943 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 EPHB6O15197 1021 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 PPFIA4O75335 1185 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 GFPT2O94808 682 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 SNAI1O95863 264 aaPredicted RBP12.69□□□□□ -0.38
PRKCB-207ENST00000486868 SERPING1P05155 500 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 GLRA2P23416 452 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 CYP2J2P51589 502 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 VAMP7P51809 220 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 SREBF2Q12772 1141 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 STRN3Q13033 797 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 TUBB2AQ13885 445 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 MTF1Q14872 753 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 PLCB4Q15147 1175 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 HSDL1Q3SXM5 330 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 DUSP28Q4G0W2 176 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 SFMBT2Q5VUG0 894 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 C17orf99Q6UX52 265 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 RRAGAQ7L523 313 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 EEPD1Q7L9B9 569 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 GLG1Q92896 1179 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 CCDC42Q96M95 316 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 MFSD14AQ96MC6 490 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 SH2D3AQ9BRG2 576 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 TINF2Q9BSI4 451 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 TUBB2BQ9BVA1 445 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 C2orf40Q9H1Z8 148 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 ERAP1Q9NZ08 941 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 TLL2Q9Y6L7 1015 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 ZNF236Q9UL36 1845 aa12.69□□□□□ -0.38
PRKCB-207ENST00000486868 LRRC53A6NM62 1247 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 RBAK-RBAKDNI3L0D1 243 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 MAGEB2O15479 319 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 ADCY3O60266 1144 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 TLR2O60603 784 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 LDHAP00338 332 aaKnown RBP12.68□□□□□ -0.38
PRKCB-207ENST00000486868 UCHL3P15374 230 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 ADSSP30520 456 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 PRKCIP41743 596 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 POLR2FP61218 127 aaKnown RBP12.68□□□□□ -0.38
PRKCB-207ENST00000486868 MKRN3Q13064 507 aaKnown RBP12.68□□□□□ -0.38
PRKCB-207ENST00000486868 MAP2K5Q13163 448 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 ASTE1Q2TB18 679 aaPredicted RBP12.68□□□□□ -0.38
PRKCB-207ENST00000486868 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 DCAF17Q5H9S7 520 aaPredicted RBP12.68□□□□□ -0.38
PRKCB-207ENST00000486868 TCERG1LQ5VWI1 586 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 OLFML2BQ68BL8 750 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 CDCA2Q69YH5 1023 aaPredicted RBP12.68□□□□□ -0.38
PRKCB-207ENST00000486868 ZPBP2Q6X784 338 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 TAS1R3Q7RTX0 852 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 EHBP1Q8NDI1 1231 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 DEPTORQ8TB45 409 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 USP6NLQ92738 828 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 CBWD1Q9BRT8 395 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 TSGA10Q9BZW7 698 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 L2HGDHQ9H9P8 463 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 ZFYVE28Q9HCC9 887 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 COQ4Q9Y3A0 265 aa12.68□□□□□ -0.38
PRKCB-207ENST00000486868 ADGRA3Q8IWK6 1321 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 ZBTB42B2RXF5 422 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 IGF2BP3O00425 579 aaKnown RBP eCLIP12.67□□□□□ -0.38
PRKCB-207ENST00000486868 EXTL3O43909 919 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 KIF5CO60282 957 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 CCDC172P0C7W6 258 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 TM4SF4P48230 202 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 JAM2P57087 298 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 ACVR2BQ13705 512 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 SPA17Q15506 151 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 TAF1CQ15572 869 aaPredicted RBP12.67□□□□□ -0.38
PRKCB-207ENST00000486868 ARHGAP29Q52LW3 1261 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 C10orf76Q5T2E6 689 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 HGSNATQ68CP4 663 aa12.67□□□□□ -0.38
PRKCB-207ENST00000486868 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
PRKCB-207ENST00000486868 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms