RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 IPO5O00410 1097 aaKnown RBP19.72■□□□□ 0.75
MCF2L-226ENST00000486210 C22orf31O95567 290 aa19.72■□□□□ 0.75
MCF2L-226ENST00000486210 PDIA4P13667 645 aaKnown RBP19.72■□□□□ 0.75
MCF2L-226ENST00000486210 HOXB8P17481 243 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-226ENST00000486210 CRYBB1P53674 252 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-226ENST00000486210 ZNF484Q5JVG2 852 aa19.72■□□□□ 0.75
MCF2L-226ENST00000486210 TTC38Q5R3I4 469 aa19.72■□□□□ 0.75
MCF2L-226ENST00000486210 KCNT2Q6UVM3 1135 aa19.72■□□□□ 0.75
MCF2L-226ENST00000486210 TMEM105Q8N8V8 129 aa19.72■□□□□ 0.75
MCF2L-226ENST00000486210 GJA10Q969M2 543 aa19.72■□□□□ 0.75
MCF2L-226ENST00000486210 TMEM117Q9H0C3 514 aa19.72■□□□□ 0.75
MCF2L-226ENST00000486210 ZSCAN16Q9H4T2 348 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-226ENST00000486210 NGRNQ9NPE2 291 aaKnown RBP19.72■□□□□ 0.75
MCF2L-226ENST00000486210 DDX25Q9UHL0 483 aaKnown RBP19.72■□□□□ 0.75
MCF2L-226ENST00000486210 PUF60Q9UHX1 559 aaKnown RBP19.72■□□□□ 0.75
MCF2L-226ENST00000486210 NOL7Q9UMY1 257 aaKnown RBP19.72■□□□□ 0.75
MCF2L-226ENST00000486210 HCFC2Q9Y5Z7 792 aa19.72■□□□□ 0.75
MCF2L-226ENST00000486210 MSH4O15457 936 aa19.71■□□□□ 0.75
MCF2L-226ENST00000486210 DHX15O43143 795 aaKnown RBP19.71■□□□□ 0.75
MCF2L-226ENST00000486210 VTNP04004 478 aa19.71■□□□□ 0.75
MCF2L-226ENST00000486210 MCM7P33993 719 aa19.71■□□□□ 0.75
MCF2L-226ENST00000486210 TRAPPC10P48553 1259 aa19.71■□□□□ 0.75
MCF2L-226ENST00000486210 FOXD4L6Q3SYB3 417 aaPredicted RBP19.71■□□□□ 0.75
MCF2L-226ENST00000486210 FOXD4L3Q6VB84 417 aaPredicted RBP19.71■□□□□ 0.75
MCF2L-226ENST00000486210 POTEDQ86YR6 584 aa19.71■□□□□ 0.75
MCF2L-226ENST00000486210 TMEM60Q9H2L4 133 aa19.71■□□□□ 0.75
MCF2L-226ENST00000486210 SORCS3Q9UPU3 1222 aa19.71■□□□□ 0.75
MCF2L-226ENST00000486210 GCFC2P16383 781 aaKnown RBP19.7■□□□□ 0.74
MCF2L-226ENST00000486210 MTMR3Q13615 1198 aa19.7■□□□□ 0.74
MCF2L-226ENST00000486210 RILPL1Q5EBL4 403 aa19.7■□□□□ 0.74
MCF2L-226ENST00000486210 ZNF746Q6NUN9 644 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-226ENST00000486210 SWSAP1Q6NVH7 229 aa19.7■□□□□ 0.74
MCF2L-226ENST00000486210 SMAP1Q8IYB5 467 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-226ENST00000486210 CHAMP1Q96JM3 812 aa19.7■□□□□ 0.74
MCF2L-226ENST00000486210 NR2E1Q9Y466 385 aa19.7■□□□□ 0.74
MCF2L-226ENST00000486210 PSAPP07602 524 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 TMC7Q7Z402 723 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 UBALD2Q8IYN6 164 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 LRRC43Q8N309 656 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 C4orf32Q8N8J7 132 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 ETNPPLQ8TBG4 499 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 CASP10Q92851 521 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 ZNF558Q96NG5 402 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 NAP1L4Q99733 375 aaKnown RBP19.69■□□□□ 0.74
MCF2L-226ENST00000486210 ADAM7Q9H2U9 754 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.69■□□□□ 0.74
MCF2L-226ENST00000486210 CEP131Q9UPN4 1083 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 SAMM50Q9Y512 469 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 DENND4AQ7Z401 1863 aa19.69■□□□□ 0.74
MCF2L-226ENST00000486210 PRR23AA6NEV1 266 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 C2orf71A6NGG8 1288 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 CLASP2O75122 1294 aaKnown RBP19.68■□□□□ 0.74
MCF2L-226ENST00000486210 WEE2P0C1S8 567 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 NBL1P41271 181 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 NUCB2P80303 420 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 CLLU1OSQ5K130 101 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 SLC39A11Q8N1S5 342 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 MRPL43Q8N983 215 aaKnown RBP19.68■□□□□ 0.74
MCF2L-226ENST00000486210 BBXQ8WY36 941 aaPredicted RBP19.68■□□□□ 0.74
MCF2L-226ENST00000486210 HAS1Q92839 578 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 FAM167AQ96KS9 214 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 KCNMB3Q9NPA1 279 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 CIZ1Q9ULV3 898 aaPredicted RBP19.68■□□□□ 0.74
MCF2L-226ENST00000486210 MAFBQ9Y5Q3 323 aaPredicted RBP19.68■□□□□ 0.74
MCF2L-226ENST00000486210 CLIC4Q9Y696 253 aa19.68■□□□□ 0.74
MCF2L-226ENST00000486210 NEMFO60524 1076 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 ASGR2P07307 311 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 PPM1AP35813 382 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 CLCN3P51790 818 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 KRT17Q04695 432 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 ITIH3Q06033 890 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 TPRNQ4KMQ1 711 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 ECHDC2Q86YB7 292 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 METTL13Q8N6R0 699 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 LINC01465Q8N7H1 131 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 FEZF2Q8TBJ5 459 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 SLC5A5Q92911 643 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 NECTIN4Q96NY8 510 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 MTMR9Q96QG7 549 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 USP28Q96RU2 1077 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 ADAMTS10Q9H324 1103 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 SPG21Q9NZD8 308 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 PCDHA10Q9Y5I2 948 aa19.67■□□□□ 0.74
MCF2L-226ENST00000486210 WDR64B1ANS9 1081 aa19.66■□□□□ 0.74
MCF2L-226ENST00000486210 HOXA2O43364 376 aa19.66■□□□□ 0.74
MCF2L-226ENST00000486210 TMOD1P28289 359 aa19.66■□□□□ 0.74
MCF2L-226ENST00000486210 CEBPZQ03701 1054 aaKnown RBP19.66■□□□□ 0.74
MCF2L-226ENST00000486210 SMC1AQ14683 1233 aaKnown RBP19.66■□□□□ 0.74
MCF2L-226ENST00000486210 SF3A1Q15459 793 aaKnown RBP19.66■□□□□ 0.74
MCF2L-226ENST00000486210 CALCRLQ16602 461 aa19.66■□□□□ 0.74
MCF2L-226ENST00000486210 CES5AQ6NT32 575 aa19.66■□□□□ 0.74
MCF2L-226ENST00000486210 KANK3Q6NY19 840 aa19.66■□□□□ 0.74
MCF2L-226ENST00000486210 TRMT1LQ7Z2T5 733 aaKnown RBP19.66■□□□□ 0.74
MCF2L-226ENST00000486210 MAP7D2Q96T17 732 aa19.66■□□□□ 0.74
MCF2L-226ENST00000486210 CHMP5Q9NZZ3 219 aa19.66■□□□□ 0.74
MCF2L-226ENST00000486210 TFIP11Q9UBB9 837 aaKnown RBP19.66■□□□□ 0.74
MCF2L-226ENST00000486210 DCHS1Q96JQ0 3298 aa19.66■□□□□ 0.74
MCF2L-226ENST00000486210 PTPRZ1P23471 2315 aaPredicted RBP19.65■□□□□ 0.74
MCF2L-226ENST00000486210 MAGEB2O15479 319 aa19.65■□□□□ 0.74
MCF2L-226ENST00000486210 NLRP11P59045 1033 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms