RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CWH43Q9H720 699 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 POLD4Q9HCU8 107 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 GPRC5CQ9NQ84 441 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 FAM105AQ9NUU6 356 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 PCDHGC5Q9Y5F6 944 aa19.63■□□□□ 0.73
COL6A1-204ENST00000486023 COL4A6Q14031 1691 aa19.62■□□□□ 0.73
COL6A1-204ENST00000486023 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.62■□□□□ 0.73
COL6A1-204ENST00000486023 ARHGEF35A5YM69 484 aa19.62■□□□□ 0.73
COL6A1-204ENST00000486023 XRCC6P12956 609 aaKnown RBP eCLIP19.62■□□□□ 0.73
COL6A1-204ENST00000486023 ATF7P17544 494 aaPredicted RBP19.62■□□□□ 0.73
COL6A1-204ENST00000486023 NCBP1Q09161 790 aaKnown RBP19.62■□□□□ 0.73
COL6A1-204ENST00000486023 CAMK1Q14012 370 aa19.62■□□□□ 0.73
COL6A1-204ENST00000486023 CLUL1Q15846 466 aa19.62■□□□□ 0.73
COL6A1-204ENST00000486023 LRRC43Q8N309 656 aa19.62■□□□□ 0.73
COL6A1-204ENST00000486023 CPB2Q96IY4 423 aa19.62■□□□□ 0.73
COL6A1-204ENST00000486023 AGPAT5Q9NUQ2 364 aa19.62■□□□□ 0.73
COL6A1-204ENST00000486023 PCDHB2Q9Y5E7 798 aa19.62■□□□□ 0.73
COL6A1-204ENST00000486023 MEIS3P2A8K0S8 358 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 SKIP12755 728 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 LAG3P18627 525 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 GLRA2P23416 452 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 RPA1P27694 616 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 ARL2P36404 184 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 HYAL1Q12794 435 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 KCNT2Q6UVM3 1135 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 ZNF598Q86UK7 904 aaKnown RBP19.61■□□□□ 0.73
COL6A1-204ENST00000486023 SNX29Q8TEQ0 813 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 ZNF558Q96NG5 402 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 BACH2Q9BYV9 841 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 GBP3Q9H0R5 595 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 KIAA1024Q9UPX6 916 aa19.61■□□□□ 0.73
COL6A1-204ENST00000486023 LRRIQ4A6NIV6 560 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 PP2D1A8MPX8 630 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 NT5C1B-RDH14C9J2C7 533 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 LIG1P18858 919 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 CDC25AP30304 524 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 CA8P35219 290 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 FXR2P51116 673 aaKnown RBP eCLIP19.6■□□□□ 0.73
COL6A1-204ENST00000486023 PTENP60484 403 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 RNASELQ05823 741 aaKnown RBP19.6■□□□□ 0.73
COL6A1-204ENST00000486023 CAPSQ13938 189 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 ECM1Q16610 540 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 HAUS3Q68CZ6 603 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 PADI6Q6TGC4 694 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 GLB1LQ6UWU2 654 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 DTHD1Q6ZMT9 781 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 ADGRD2Q7Z7M1 963 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 PGBD4Q96DM1 585 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 PABPC5Q96DU9 382 aaKnown RBP19.6■□□□□ 0.73
COL6A1-204ENST00000486023 RAB34Q9BZG1 259 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
COL6A1-204ENST00000486023 DBR1Q9UK59 544 aaKnown RBP19.6■□□□□ 0.73
COL6A1-204ENST00000486023 TNFRSF10AO00220 468 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 PER2O15055 1255 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 LINC01565O15544 149 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 ZC3H11AO75152 810 aaKnown RBP eCLIP19.59■□□□□ 0.73
COL6A1-204ENST00000486023 HOXA11P31270 313 aaPredicted RBP19.59■□□□□ 0.73
COL6A1-204ENST00000486023 NRIP1P48552 1158 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 ERVFC1P60507 584 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 KRT17Q04695 432 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 CDR2LQ86X02 465 aaPredicted RBP19.59■□□□□ 0.73
COL6A1-204ENST00000486023 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.59■□□□□ 0.73
COL6A1-204ENST00000486023 PPP2R3CQ969Q6 453 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 APOL6Q9BWW8 343 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 TLR9Q9NR96 1032 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 DDX19AQ9NUU7 478 aaKnown RBP19.59■□□□□ 0.73
COL6A1-204ENST00000486023 PUF60Q9UHX1 559 aaKnown RBP19.59■□□□□ 0.73
COL6A1-204ENST00000486023 TTC28Q96AY4 2481 aa19.59■□□□□ 0.73
COL6A1-204ENST00000486023 NLRC5Q86WI3 1866 aa19.58■□□□□ 0.73
COL6A1-204ENST00000486023 TSPAN1O60635 241 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 ALDH7A1P49419 539 aaKnown RBP19.58■□□□□ 0.72
COL6A1-204ENST00000486023 RAB27AP51159 221 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 PDIA5Q14554 519 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 IL17AQ16552 155 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 CSPP1Q1MSJ5 1256 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 TMEM132AQ24JP5 1023 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 LEXMQ3ZCV2 418 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 RILPL1Q5EBL4 403 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 NOMO2Q5JPE7 1267 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 PLPP4Q5VZY2 271 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 KRT79Q5XKE5 535 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 PTCRAQ6ISU1 281 aaPredicted RBP19.58■□□□□ 0.72
COL6A1-204ENST00000486023 MCPH1Q8NEM0 835 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 MRPL9Q9BYD2 267 aaKnown RBP19.58■□□□□ 0.72
COL6A1-204ENST00000486023 BHMT2Q9H2M3 363 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 TLE6Q9H808 572 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 ENTPD7Q9NQZ7 604 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.58■□□□□ 0.72
COL6A1-204ENST00000486023 SPG21Q9NZD8 308 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
COL6A1-204ENST00000486023 VPS37CA5D8V6 355 aaPredicted RBP19.57■□□□□ 0.72
COL6A1-204ENST00000486023 OFD1O75665 1012 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 POMCP01189 267 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 ITGA4P13612 1032 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 NDUFV1P49821 464 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 BCAR1P56945 870 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 MBTD1Q05BQ5 628 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 DLX2Q07687 328 aaPredicted RBP19.57■□□□□ 0.72
COL6A1-204ENST00000486023 UBXN11Q5T124 520 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 NOTUMQ6P988 496 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms