RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 PHF20Q9BVI0 1012 aa22.79■■□□□ 1.24
CHRD-215ENST00000485883 ZBP1Q9H171 429 aa22.79■■□□□ 1.24
CHRD-215ENST00000485883 IFT122Q9HBG6 1241 aa22.79■■□□□ 1.24
CHRD-215ENST00000485883 KCNMB3Q9NPA1 279 aa22.79■■□□□ 1.24
CHRD-215ENST00000485883 CYP26B1Q9NR63 512 aa22.79■■□□□ 1.24
CHRD-215ENST00000485883 TSHZ2Q9NRE2 1034 aa22.79■■□□□ 1.24
CHRD-215ENST00000485883 PDRG1Q9NUG6 133 aa22.79■■□□□ 1.24
CHRD-215ENST00000485883 TBC1D13Q9NVG8 400 aa22.79■■□□□ 1.24
CHRD-215ENST00000485883 INPP5FQ9Y2H2 1132 aa22.79■■□□□ 1.24
CHRD-215ENST00000485883 B4GALT3O60512 393 aa22.78■■□□□ 1.24
CHRD-215ENST00000485883 OFD1O75665 1012 aa22.78■■□□□ 1.24
CHRD-215ENST00000485883 WEE2P0C1S8 567 aa22.78■■□□□ 1.24
CHRD-215ENST00000485883 PPP2R5CQ13362 524 aa22.78■■□□□ 1.24
CHRD-215ENST00000485883 PTPN21Q16825 1174 aa22.78■■□□□ 1.24
CHRD-215ENST00000485883 CPLX2Q6PUV4 134 aaKnown RBP22.78■■□□□ 1.24
CHRD-215ENST00000485883 C12orf76Q8N812 135 aaPredicted RBP22.78■■□□□ 1.24
CHRD-215ENST00000485883 FEZF2Q8TBJ5 459 aa22.78■■□□□ 1.24
CHRD-215ENST00000485883 OXER1Q8TDS5 423 aa22.78■■□□□ 1.24
CHRD-215ENST00000485883 INO80BQ9C086 356 aaPredicted RBP22.78■■□□□ 1.24
CHRD-215ENST00000485883 POMKQ9H5K3 350 aa22.78■■□□□ 1.24
CHRD-215ENST00000485883 GALTP07902 379 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 QARSP47897 775 aaKnown RBP22.77■■□□□ 1.24
CHRD-215ENST00000485883 AFF1P51825 1210 aaKnown RBP22.77■■□□□ 1.24
CHRD-215ENST00000485883 ANAPC15P60006 121 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 TPRNQ4KMQ1 711 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 NOMO2Q5JPE7 1267 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 SUGP1Q8IWZ8 645 aaKnown RBP22.77■■□□□ 1.24
CHRD-215ENST00000485883 FBXL6Q8N531 539 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 TMEM143Q96AN5 459 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 IGSF21Q96ID5 467 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 SLKQ9H2G2 1235 aaPredicted RBP22.77■■□□□ 1.24
CHRD-215ENST00000485883 ADAM7Q9H2U9 754 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 BMP2KQ9NSY1 1161 aaPredicted RBP22.77■■□□□ 1.24
CHRD-215ENST00000485883 DNAJB4Q9UDY4 337 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 ZDBF2Q9HCK1 2354 aa22.77■■□□□ 1.24
CHRD-215ENST00000485883 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.76■■□□□ 1.23
CHRD-215ENST00000485883 CCDC194A0A1B0GVG4 234 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 ZNF623O75123 536 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 VCPP55072 806 aaKnown RBP22.76■■□□□ 1.23
CHRD-215ENST00000485883 EARS2Q5JPH6 523 aaKnown RBP22.76■■□□□ 1.23
CHRD-215ENST00000485883 GLB1LQ6UWU2 654 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 NEK8Q86SG6 692 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 ZNF280BQ86YH2 543 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 FAM177A1Q8N128 213 aaPredicted RBP22.76■■□□□ 1.23
CHRD-215ENST00000485883 HAS1Q92839 578 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 CEP170P1Q96L14 293 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 VN1R3Q9BXE9 311 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 GBP3Q9H0R5 595 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 MINDY3Q9H8M7 445 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 PCDHB2Q9Y5E7 798 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 COL4A3BPQ9Y5P4 624 aa22.76■■□□□ 1.23
CHRD-215ENST00000485883 C2CD4DB7Z1M9 353 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 CTSAP10619 480 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 SKIP12755 728 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 EPCAMP16422 314 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 SLC11A1P49279 550 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 RARS2Q5T160 578 aaKnown RBP22.75■■□□□ 1.23
CHRD-215ENST00000485883 PPP4R3AQ6IN85 833 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 CES5AQ6NT32 575 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 AGMOQ6ZNB7 445 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 PIK3AP1Q6ZUJ8 805 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 DDX53Q86TM3 631 aaKnown RBP22.75■■□□□ 1.23
CHRD-215ENST00000485883 FAM20AQ96MK3 541 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 DHX33Q9H6R0 707 aaKnown RBP22.75■■□□□ 1.23
CHRD-215ENST00000485883 AGPAT5Q9NUQ2 364 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 RGL1Q9NZL6 768 aa22.75■■□□□ 1.23
CHRD-215ENST00000485883 ZBTB39O15060 712 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 CCNT1O60563 726 aaKnown RBP22.74■■□□□ 1.23
CHRD-215ENST00000485883 PDGFBP01127 241 aaPredicted RBP22.74■■□□□ 1.23
CHRD-215ENST00000485883 P4HBP07237 508 aaKnown RBP22.74■■□□□ 1.23
CHRD-215ENST00000485883 SRGAP2CP0DJJ0 459 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 RNASELQ05823 741 aaKnown RBP22.74■■□□□ 1.23
CHRD-215ENST00000485883 ITIH3Q06033 890 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 TCF15Q12870 199 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 ZBTB33Q86T24 672 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 KREMEN2Q8NCW0 462 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 PRPF31Q8WWY3 499 aaKnown RBP22.74■■□□□ 1.23
CHRD-215ENST00000485883 SLC7A3Q8WY07 619 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 JPH2Q9BR39 696 aaPredicted RBP22.74■■□□□ 1.23
CHRD-215ENST00000485883 SMOC2Q9H3U7 446 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 TPCN1Q9ULQ1 816 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 NR2E1Q9Y466 385 aa22.74■■□□□ 1.23
CHRD-215ENST00000485883 FAM205CA6NFA0 338 aa22.73■■□□□ 1.23
CHRD-215ENST00000485883 DDHD2O94830 711 aa22.73■■□□□ 1.23
CHRD-215ENST00000485883 HOXA11P31270 313 aaPredicted RBP22.73■■□□□ 1.23
CHRD-215ENST00000485883 RAB27AP51159 221 aa22.73■■□□□ 1.23
CHRD-215ENST00000485883 POLGP54098 1239 aaPredicted RBP22.73■■□□□ 1.23
CHRD-215ENST00000485883 BMS1Q14692 1282 aaKnown RBP22.73■■□□□ 1.23
CHRD-215ENST00000485883 UBXN11Q5T124 520 aa22.73■■□□□ 1.23
CHRD-215ENST00000485883 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
CHRD-215ENST00000485883 SLC22A17Q8WUG5 538 aa22.73■■□□□ 1.23
CHRD-215ENST00000485883 LXNQ9BS40 222 aa22.73■■□□□ 1.23
CHRD-215ENST00000485883 IRAK3Q9Y616 596 aa22.73■■□□□ 1.23
CHRD-215ENST00000485883 CTDNEP1O95476 244 aa22.72■■□□□ 1.23
CHRD-215ENST00000485883 GCFC2P16383 781 aaKnown RBP22.72■■□□□ 1.23
CHRD-215ENST00000485883 YWHABP31946 246 aaKnown RBP22.72■■□□□ 1.23
CHRD-215ENST00000485883 LAMTOR4Q0VGL1 99 aa22.72■■□□□ 1.23
CHRD-215ENST00000485883 CTTNQ14247 550 aaKnown RBP22.72■■□□□ 1.23
CHRD-215ENST00000485883 EPHA7Q15375 998 aa22.72■■□□□ 1.23
CHRD-215ENST00000485883 NCAPH2Q6IBW4 605 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms