RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 DHX33Q9H6R0 707 aaKnown RBP19.18■□□□□ 0.66
SMC4-216ENST00000485645 IFT122Q9HBG6 1241 aa19.18■□□□□ 0.66
SMC4-216ENST00000485645 FAM105AQ9NUU6 356 aa19.18■□□□□ 0.66
SMC4-216ENST00000485645 RGL1Q9NZL6 768 aa19.18■□□□□ 0.66
SMC4-216ENST00000485645 LOC730098B7Z3J9 87 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 NT5C1B-RDH14C9J2C7 533 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 FDPSP14324 419 aaKnown RBP19.17■□□□□ 0.66
SMC4-216ENST00000485645 YWHABP31946 246 aaKnown RBP19.17■□□□□ 0.66
SMC4-216ENST00000485645 TECP42680 631 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 KCNC3Q14003 757 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 SMC1AQ14683 1233 aaKnown RBP19.17■□□□□ 0.66
SMC4-216ENST00000485645 BMS1Q14692 1282 aaKnown RBP19.17■□□□□ 0.66
SMC4-216ENST00000485645 ME3Q16798 604 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 LONRF3Q496Y0 759 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 ANKRD54Q6NXT1 300 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 LLGL2Q6P1M3 1020 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 GLB1LQ6UWU2 654 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 PRPF31Q8WWY3 499 aaKnown RBP19.17■□□□□ 0.66
SMC4-216ENST00000485645 PSPC1Q8WXF1 523 aaKnown RBP19.17■□□□□ 0.66
SMC4-216ENST00000485645 TMEM143Q96AN5 459 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 TMEM169Q96HH4 297 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 DYDC2Q96IM9 177 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 ZSWIM4Q9H7M6 989 aa19.17■□□□□ 0.66
SMC4-216ENST00000485645 CARNS1A5YM72 827 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 FAM205CA6NFA0 338 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 GAS2O43903 313 aaKnown RBP19.16■□□□□ 0.66
SMC4-216ENST00000485645 ZNF623O75123 536 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 ZC3H11AO75152 810 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMC4-216ENST00000485645 SRGAP2CP0DJJ0 459 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 SPIRE1Q08AE8 756 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 SRGAP1Q7Z6B7 1085 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 MRPL43Q8N983 215 aaKnown RBP19.16■□□□□ 0.66
SMC4-216ENST00000485645 TCP11Q8WWU5 503 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 SUSD6Q92537 303 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 GTF3C6Q969F1 213 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 PGBD4Q96DM1 585 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 RPGRIP1Q96KN7 1286 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 BMP2KQ9NSY1 1161 aaPredicted RBP19.16■□□□□ 0.66
SMC4-216ENST00000485645 AGPAT5Q9NUQ2 364 aa19.16■□□□□ 0.66
SMC4-216ENST00000485645 ASAP2O43150 1006 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 EIF5BO60841 1220 aaKnown RBP19.15■□□□□ 0.66
SMC4-216ENST00000485645 LARGE1O95461 756 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 HOXB8P17481 243 aaPredicted RBP19.15■□□□□ 0.66
SMC4-216ENST00000485645 CA8P35219 290 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 CYP4A11Q02928 519 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 RNASELQ05823 741 aaKnown RBP19.15■□□□□ 0.66
SMC4-216ENST00000485645 LAMTOR4Q0VGL1 99 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 CTTNQ14247 550 aaKnown RBP19.15■□□□□ 0.66
SMC4-216ENST00000485645 CBX2Q14781 532 aaPredicted RBP19.15■□□□□ 0.66
SMC4-216ENST00000485645 XKR9Q5GH70 373 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 NOMO2Q5JPE7 1267 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 TPH2Q8IWU9 490 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 EDAQ92838 391 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 TNFRSF25Q93038 417 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 S1PR5Q9H228 398 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 TBC1D13Q9NVG8 400 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 INPP5FQ9Y2H2 1132 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 PCDHB2Q9Y5E7 798 aa19.15■□□□□ 0.66
SMC4-216ENST00000485645 C2orf71A6NGG8 1288 aa19.14■□□□□ 0.65
SMC4-216ENST00000485645 MEIS3P2A8K0S8 358 aa19.14■□□□□ 0.65
SMC4-216ENST00000485645 OFD1O75665 1012 aa19.14■□□□□ 0.65
SMC4-216ENST00000485645 EMC2Q15006 297 aa19.14■□□□□ 0.65
SMC4-216ENST00000485645 NSUN7Q8NE18 718 aaKnown RBP19.14■□□□□ 0.65
SMC4-216ENST00000485645 CASP10Q92851 521 aa19.14■□□□□ 0.65
SMC4-216ENST00000485645 MTRQ99707 1265 aa19.14■□□□□ 0.65
SMC4-216ENST00000485645 NRDE2Q9H7Z3 1164 aa19.14■□□□□ 0.65
SMC4-216ENST00000485645 MINDY3Q9H8M7 445 aa19.14■□□□□ 0.65
SMC4-216ENST00000485645 PCDHA12Q9UN75 941 aa19.14■□□□□ 0.65
SMC4-216ENST00000485645 ZBTB39O15060 712 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 SLITRK3O94933 977 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 CXCL14O95715 111 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 NEK4P51957 841 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 TRIM29Q14134 588 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 CALCRLQ16602 461 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 TPRNQ4KMQ1 711 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 SYCE2Q6PIF2 218 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 HFE2Q6ZVN8 426 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 FERMT3Q86UX7 667 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 VPS52Q8N1B4 723 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 RNF149Q8NC42 400 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 URGCPQ8TCY9 931 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 IGSF21Q96ID5 467 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 EIF2AK1Q9BQI3 630 aaKnown RBP19.13■□□□□ 0.65
SMC4-216ENST00000485645 APOL5Q9BWW9 433 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 GBP3Q9H0R5 595 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 HCFC2Q9Y5Z7 792 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 MUC6Q6W4X9 2439 aa19.13■□□□□ 0.65
SMC4-216ENST00000485645 BTBD18B2RXH4 712 aa19.12■□□□□ 0.65
SMC4-216ENST00000485645 CLASP2O75122 1294 aaKnown RBP19.12■□□□□ 0.65
SMC4-216ENST00000485645 GALTP07902 379 aa19.12■□□□□ 0.65
SMC4-216ENST00000485645 MRPL10Q7Z7H8 261 aaKnown RBP19.12■□□□□ 0.65
SMC4-216ENST00000485645 DDX53Q86TM3 631 aaKnown RBP19.12■□□□□ 0.65
SMC4-216ENST00000485645 TMEM173Q86WV6 379 aaPredicted RBP19.12■□□□□ 0.65
SMC4-216ENST00000485645 DIS3L2Q8IYB7 885 aaKnown RBP19.12■□□□□ 0.65
SMC4-216ENST00000485645 TMEM87AQ8NBN3 555 aa19.12■□□□□ 0.65
SMC4-216ENST00000485645 MFSD14AQ96MC6 490 aa19.12■□□□□ 0.65
SMC4-216ENST00000485645 ZBP1Q9H171 429 aa19.12■□□□□ 0.65
SMC4-216ENST00000485645 TRIOO75962 3097 aa19.12■□□□□ 0.65
SMC4-216ENST00000485645 TECTAO75443 2155 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms