RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 KIFAP3Q92845 792 aa21.19■□□□□ 0.98
SNX17-206ENST00000484886 PNMA5Q96PV4 448 aa21.19■□□□□ 0.98
SNX17-206ENST00000484886 USP28Q96RU2 1077 aa21.19■□□□□ 0.98
SNX17-206ENST00000484886 CDH23Q9H251 3354 aa21.19■□□□□ 0.98
SNX17-206ENST00000484886 RALGAPA2Q2PPJ7 1873 aa21.19■□□□□ 0.98
SNX17-206ENST00000484886 MYH15Q9Y2K3 1946 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 SKIP12755 728 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 LIG1P18858 919 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 RAB27AP51159 221 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 MBTD1Q05BQ5 628 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 STK38Q15208 465 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 PCBP1Q15365 356 aaKnown RBP eCLIP21.18■□□□□ 0.98
SNX17-206ENST00000484886 TMEM132AQ24JP5 1023 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 FOXD4L6Q3SYB3 417 aaPredicted RBP21.18■□□□□ 0.98
SNX17-206ENST00000484886 LONRF3Q496Y0 759 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 HYIQ5T013 277 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 FOXD4L3Q6VB84 417 aaPredicted RBP21.18■□□□□ 0.98
SNX17-206ENST00000484886 DEPTORQ8TB45 409 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 BSNDQ8WZ55 320 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 RUSC1Q9BVN2 902 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 FAM105AQ9NUU6 356 aa21.18■□□□□ 0.98
SNX17-206ENST00000484886 SLC26A4O43511 780 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 TSPAN1O60635 241 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 EOMESO95936 686 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 BMPR1AP36894 532 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 GPM6BQ13491 265 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 BECN1Q14457 450 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 TMEM119Q4V9L6 283 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 SPECC1Q5M775 1068 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 IFNLR1Q8IU57 520 aaPredicted RBP21.17■□□□□ 0.98
SNX17-206ENST00000484886 KCTD17Q8N5Z5 321 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 CPB2Q96IY4 423 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 NFKBIZQ9BYH8 718 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 TMEM117Q9H0C3 514 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 CSRNP2Q9H175 543 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 C2orf40Q9H1Z8 148 aa21.17■□□□□ 0.98
SNX17-206ENST00000484886 FBXO2Q9UK22 296 aaPredicted RBP21.17■□□□□ 0.98
SNX17-206ENST00000484886 FNDC1Q4ZHG4 1894 aaPredicted RBP21.17■□□□□ 0.98
SNX17-206ENST00000484886 HIP1RO75146 1068 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 F13A1P00488 732 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 PLA2G4BP0C869 781 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 AXLP30530 894 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 TXLNAP40222 546 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 NAMPTP43490 491 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 RAD51AP2Q09MP3 1159 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 KARSQ15046 597 aaKnown RBP21.16■□□□□ 0.98
SNX17-206ENST00000484886 RINT1Q6NUQ1 792 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 NOTUMQ6P988 496 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 HELQQ8TDG4 1101 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 CLP1Q92989 425 aaKnown RBP21.16■□□□□ 0.98
SNX17-206ENST00000484886 LPPQ93052 612 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 DRC1Q96MC2 740 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 CLIC6Q96NY7 704 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 C11orf84Q9BUA3 381 aaPredicted RBP21.16■□□□□ 0.98
SNX17-206ENST00000484886 TFIP11Q9UBB9 837 aaKnown RBP21.16■□□□□ 0.98
SNX17-206ENST00000484886 PCDHB2Q9Y5E7 798 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 SRPRBQ9Y5M8 271 aaKnown RBP21.16■□□□□ 0.98
SNX17-206ENST00000484886 MTCH2Q9Y6C9 303 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 CHD7Q9P2D1 2997 aa21.16■□□□□ 0.98
SNX17-206ENST00000484886 CCDC169A6NNP5 214 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 LPXNO60711 386 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 RB1P06400 928 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 ATF7P17544 494 aaPredicted RBP21.15■□□□□ 0.98
SNX17-206ENST00000484886 PLCG1P19174 1290 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 HOXA11P31270 313 aaPredicted RBP21.15■□□□□ 0.98
SNX17-206ENST00000484886 DHX8Q14562 1220 aaKnown RBP21.15■□□□□ 0.98
SNX17-206ENST00000484886 SLC39A14Q15043 492 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 PTPROQ16827 1216 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 CDCA2Q69YH5 1023 aaPredicted RBP21.15■□□□□ 0.98
SNX17-206ENST00000484886 ZNF598Q86UK7 904 aaKnown RBP21.15■□□□□ 0.98
SNX17-206ENST00000484886 KRI1Q8N9T8 703 aaKnown RBP21.15■□□□□ 0.98
SNX17-206ENST00000484886 PGBD4Q96DM1 585 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 TRAIPQ9BWF2 469 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 TRIM6Q9C030 488 aaPredicted RBP21.15■□□□□ 0.98
SNX17-206ENST00000484886 AAASQ9NRG9 546 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 PRMT7Q9NVM4 692 aaPredicted RBP21.15■□□□□ 0.98
SNX17-206ENST00000484886 DAXXQ9UER7 740 aaPredicted RBP21.15■□□□□ 0.98
SNX17-206ENST00000484886 KIAA1671Q9BY89 1806 aa21.15■□□□□ 0.98
SNX17-206ENST00000484886 H3BNC9 293 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 B4GALT5O43286 388 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 CSPG5O95196 566 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 NASPP49321 788 aaPredicted RBP21.14■□□□□ 0.97
SNX17-206ENST00000484886 DMP1Q13316 513 aaPredicted RBP21.14■□□□□ 0.97
SNX17-206ENST00000484886 PKP1Q13835 747 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 SKIV2LQ15477 1246 aaKnown RBP21.14■□□□□ 0.97
SNX17-206ENST00000484886 MAPK6Q16659 721 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 CLLU1OSQ5K130 101 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 C1orf186Q6ZWK4 172 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 LRRC43Q8N309 656 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 SYT2Q8N9I0 419 aaPredicted RBP21.14■□□□□ 0.97
SNX17-206ENST00000484886 SYMPKQ92797 1274 aaKnown RBP21.14■□□□□ 0.97
SNX17-206ENST00000484886 CCDC51Q96ER9 411 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 EPSTI1Q96J88 318 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 CASD1Q96PB1 797 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 KIFC3Q9BVG8 833 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 RNF19AQ9NV58 838 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 TYW1Q9NV66 732 aaKnown RBP21.14■□□□□ 0.97
SNX17-206ENST00000484886 HCSTQ9UBK5 93 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 CCDC39Q9UFE4 941 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 INPP5FQ9Y2H2 1132 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms