RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 RASGRP4Q8TDF6 673 aa10.1□□□□□ -0.79
COL8A1-207ENST00000483969 TBCKQ8TEA7 893 aa10.1□□□□□ -0.79
COL8A1-207ENST00000483969 CRYGNQ8WXF5 182 aa10.1□□□□□ -0.79
COL8A1-207ENST00000483969 SEPT1Q8WYJ6 367 aa10.1□□□□□ -0.79
COL8A1-207ENST00000483969 NAP1L4Q99733 375 aaKnown RBP10.1□□□□□ -0.79
COL8A1-207ENST00000483969 SDF4Q9BRK5 362 aa10.1□□□□□ -0.79
COL8A1-207ENST00000483969 KATNAL1Q9BW62 490 aa10.1□□□□□ -0.79
COL8A1-207ENST00000483969 SMG9Q9H0W8 520 aaKnown RBP10.1□□□□□ -0.79
COL8A1-207ENST00000483969 ADAMTS3O15072 1205 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 SORBS3O60504 671 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 DTNBO60941 627 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 ATP9AO75110 1047 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 SUPT20HL2P0C7V6 817 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 ARP10275 920 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 KCNA2P16389 499 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 SETQ01105 290 aaPredicted RBP10.09□□□□□ -0.79
COL8A1-207ENST00000483969 ST3GAL1Q11201 340 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 HSDL1Q3SXM5 330 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 KRT40Q6A162 431 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 SLC43A3Q8NBI5 491 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 CYP2W1Q8TAV3 490 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 AGO4Q9HCK5 861 aaKnown RBP10.09□□□□□ -0.79
COL8A1-207ENST00000483969 TBC1D22BQ9NU19 505 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 TMEM39AQ9NV64 488 aa10.09□□□□□ -0.79
COL8A1-207ENST00000483969 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.09□□□□□ -0.79
COL8A1-207ENST00000483969 NFASCO94856 1347 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 DOCK3Q8IZD9 2030 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 CYP3A7-CYP3A51PA0A087WV96 503 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 FAM86B1E9PN63 330 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 H0YGN5 161 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 PQBP1O60828 265 aaKnown RBP10.08□□□□□ -0.8
COL8A1-207ENST00000483969 XYLBO75191 536 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 MMP1P03956 469 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 CLTBP09497 229 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 FAM86B2P0C5J1 330 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 HOXD8P13378 290 aaPredicted RBP10.08□□□□□ -0.8
COL8A1-207ENST00000483969 CYP3A7P24462 503 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 NOS3P29474 1203 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 CHMP4BP1P59074 171 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 PSMC6P62333 389 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 PLAURQ03405 335 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 NPY5RQ15761 445 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 PRR16Q569H4 304 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 FAM47CQ5HY64 1035 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 NFRKBQ6P4R8 1299 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 MOXD1Q6UVY6 613 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 C7orf31Q8N865 590 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 TNPO1Q92973 898 aaKnown RBP10.08□□□□□ -0.8
COL8A1-207ENST00000483969 GPR20Q99678 358 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 LBHD1Q9BQE6 289 aaPredicted RBP10.08□□□□□ -0.8
COL8A1-207ENST00000483969 ZNF577Q9BSK1 485 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 BCAS3Q9H6U6 928 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 SRA1Q9HD15 236 aaKnown RBP10.08□□□□□ -0.8
COL8A1-207ENST00000483969 GJB4Q9NTQ9 266 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 SLC9A2Q9UBY0 812 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 TCEAL9Q9UHQ7 104 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 SMC3Q9UQE7 1217 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 HTTP42858 3142 aa10.08□□□□□ -0.8
COL8A1-207ENST00000483969 IGLV3-22A0A075B6J6 115 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 BTBD18B2RXH4 712 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 H3BRB1 525 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 IPO5O00410 1097 aaKnown RBP10.07□□□□□ -0.8
COL8A1-207ENST00000483969 PSAPP07602 524 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 GCFC2P16383 781 aaKnown RBP10.07□□□□□ -0.8
COL8A1-207ENST00000483969 SOX18P35713 384 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 SP4Q02446 784 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 FAAP100Q0VG06 881 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 GNL2Q13823 731 aaKnown RBP10.07□□□□□ -0.8
COL8A1-207ENST00000483969 INF2Q27J81 1249 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 LETM2Q2VYF4 491 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 Q4G0T1 1027 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 UTP14CQ5TAP6 766 aaKnown RBP10.07□□□□□ -0.8
COL8A1-207ENST00000483969 PPP4R3AQ6IN85 833 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 PIK3AP1Q6ZUJ8 805 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 NEK8Q86SG6 692 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 TREML1Q86YW5 311 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 DIS3L2Q8IYB7 885 aaKnown RBP10.07□□□□□ -0.8
COL8A1-207ENST00000483969 FBXO18Q8NFZ0 1043 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 KAT2BQ92831 832 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 SMARCAD1Q9H4L7 1026 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 TUT1Q9H6E5 874 aaKnown RBP10.07□□□□□ -0.8
COL8A1-207ENST00000483969 AZI2Q9H6S1 392 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 PRDM5Q9NQX1 630 aaPredicted RBP10.07□□□□□ -0.8
COL8A1-207ENST00000483969 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
COL8A1-207ENST00000483969 ZMYND8Q9ULU4 1186 aaPredicted RBP10.07□□□□□ -0.8
COL8A1-207ENST00000483969 GRIN2DO15399 1336 aa10.07□□□□□ -0.8
COL8A1-207ENST00000483969 GSTTP1A0A1W2PQM5 241 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 HAS3O00219 553 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 KIAA0355O15063 1070 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 MARCH6O60337 910 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 DEAF1O75398 565 aaPredicted RBP10.06□□□□□ -0.8
COL8A1-207ENST00000483969 BAG4O95429 457 aaKnown RBP10.06□□□□□ -0.8
COL8A1-207ENST00000483969 F2P00734 622 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 CD4P01730 458 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 LGALS2P05162 132 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 GNAT1P11488 350 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 RAG1P15918 1043 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 SYN1P17600 705 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 TCF7P36402 384 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms