RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 MBTD1Q05BQ5 628 aa29.35■■■□□ 2.29
GTF3C4-202ENST00000483873 DAW1Q8N136 415 aa29.35■■■□□ 2.29
GTF3C4-202ENST00000483873 KCTD17Q8N5Z5 321 aa29.35■■■□□ 2.29
GTF3C4-202ENST00000483873 MYLIPQ8WY64 445 aa29.35■■■□□ 2.29
GTF3C4-202ENST00000483873 ZNF689Q96CS4 500 aaPredicted RBP29.35■■■□□ 2.29
GTF3C4-202ENST00000483873 CHAMP1Q96JM3 812 aa29.35■■■□□ 2.29
GTF3C4-202ENST00000483873 AGPAT5Q9NUQ2 364 aa29.35■■■□□ 2.29
GTF3C4-202ENST00000483873 LRFN2Q9ULH4 789 aa29.35■■■□□ 2.29
GTF3C4-202ENST00000483873 RALGAPA2Q2PPJ7 1873 aa29.34■■■□□ 2.29
GTF3C4-202ENST00000483873 HIP1RO75146 1068 aa29.34■■■□□ 2.29
GTF3C4-202ENST00000483873 DDIT3P35638 169 aa29.34■■■□□ 2.29
GTF3C4-202ENST00000483873 FAM189BP81408 668 aa29.34■■■□□ 2.29
GTF3C4-202ENST00000483873 NFKBIZQ9BYH8 718 aa29.34■■■□□ 2.29
GTF3C4-202ENST00000483873 CHST12Q9NRB3 414 aa29.34■■■□□ 2.29
GTF3C4-202ENST00000483873 PCDHB7Q9Y5E2 793 aa29.34■■■□□ 2.29
GTF3C4-202ENST00000483873 ADGRA3Q8IWK6 1321 aa29.33■■■□□ 2.29
GTF3C4-202ENST00000483873 EPOPA6NHQ4 379 aa29.33■■■□□ 2.29
GTF3C4-202ENST00000483873 PPP6R2O75170 966 aa29.33■■■□□ 2.29
GTF3C4-202ENST00000483873 RAD51AP2Q09MP3 1159 aa29.33■■■□□ 2.29
GTF3C4-202ENST00000483873 MAPK7Q13164 816 aa29.33■■■□□ 2.29
GTF3C4-202ENST00000483873 ECHDC2Q86YB7 292 aa29.33■■■□□ 2.29
GTF3C4-202ENST00000483873 KIFAP3Q92845 792 aa29.33■■■□□ 2.29
GTF3C4-202ENST00000483873 MTUS1Q9ULD2 1270 aa29.33■■■□□ 2.29
GTF3C4-202ENST00000483873 TRANK1O15050 2925 aa29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 HOXA11P31270 313 aaPredicted RBP29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 DHX8Q14562 1220 aaKnown RBP29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 AMHR2Q16671 573 aa29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 CDCA2Q69YH5 1023 aaPredicted RBP29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 TWF2Q6IBS0 349 aaKnown RBP29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 ARNTL2Q8WYA1 636 aa29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 KIFC3Q9BVG8 833 aa29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 TMEM161AQ9NX61 479 aa29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 DACT1Q9NYF0 836 aa29.32■■■□□ 2.28
GTF3C4-202ENST00000483873 NPHP3-ACAD11A0A0J9YXS1 232 aa29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 TSPAN1O60635 241 aa29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 ERLIN2O94905 339 aa29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 NAMPTP43490 491 aa29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 MCM6Q14566 821 aa29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 PAN2Q504Q3 1202 aaKnown RBP29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 RAD54LQ92698 747 aa29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 CPB2Q96IY4 423 aa29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 IPO9Q96P70 1041 aaKnown RBP29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 C17orf80Q9BSJ5 609 aa29.31■■■□□ 2.28
GTF3C4-202ENST00000483873 A0A0U1RQF3 1178 aa29.3■■■□□ 2.28
GTF3C4-202ENST00000483873 RFXAPO00287 272 aa29.3■■■□□ 2.28
GTF3C4-202ENST00000483873 FGFR1P11362 822 aa29.3■■■□□ 2.28
GTF3C4-202ENST00000483873 ATF7P17544 494 aaPredicted RBP29.3■■■□□ 2.28
GTF3C4-202ENST00000483873 GUCY2CP25092 1073 aa29.3■■■□□ 2.28
GTF3C4-202ENST00000483873 ARSHQ5FYA8 562 aa29.3■■■□□ 2.28
GTF3C4-202ENST00000483873 ATL3Q6DD88 541 aa29.3■■■□□ 2.28
GTF3C4-202ENST00000483873 ELAC1Q9H777 363 aaKnown RBP29.3■■■□□ 2.28
GTF3C4-202ENST00000483873 RNF19AQ9NV58 838 aa29.3■■■□□ 2.28
GTF3C4-202ENST00000483873 B4GALT5O43286 388 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 TXLNAP40222 546 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 CACNB1Q02641 598 aaPredicted RBP29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 BTG3Q14201 252 aaPredicted RBP29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 PPP2R5AQ15172 486 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 GPBP1Q86WP2 473 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 ZBTB8OSQ8IWT0 167 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 FIBCD1Q8N539 461 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 RNF169Q8NCN4 708 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 IFT74Q96LB3 600 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 TGS1Q96RS0 853 aaKnown RBP29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 CCDC39Q9UFE4 941 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 EYSQ5T1H1 3165 aa29.29■■■□□ 2.28
GTF3C4-202ENST00000483873 A0A087X0B3 334 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 SFI1A8K8P3 1242 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 PEX3P56589 373 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 ERVK-21P61565 698 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 ZNF598Q86UK7 904 aaKnown RBP29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 DEPTORQ8TB45 409 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 LARP4BQ92615 738 aaKnown RBP29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 DRC1Q96MC2 740 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 TRAIPQ9BWF2 469 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 FAM105AQ9NUU6 356 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 LINC00271P0C7V0 271 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 LONRF3Q496Y0 759 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 NAALADL2Q58DX5 795 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 UBXN11Q5T124 520 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 CMTR2Q8IYT2 770 aaKnown RBP29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 KCNG4Q8TDN1 519 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 TIPINQ9BVW5 301 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 PANK2Q9BZ23 570 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 C2orf40Q9H1Z8 148 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 CFAP45Q9UL16 551 aa29.28■■■□□ 2.28
GTF3C4-202ENST00000483873 CUTAO60888 179 aa29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 EDN1P05305 212 aa29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 ARF4P18085 180 aaPredicted RBP29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 ADGRE1Q14246 886 aa29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 PCBP1Q15365 356 aaKnown RBP eCLIP29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 AXDND1Q5T1B0 1012 aaPredicted RBP29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 RRAGBQ5VZM2 374 aa29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 LPPQ93052 612 aa29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 CCDC113Q9H0I3 377 aa29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 RNF216Q9NWF9 866 aaPredicted RBP29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 KCND2Q9NZV8 630 aa29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 USP20Q9Y2K6 914 aa29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 MRPL42Q9Y6G3 142 aaKnown RBP29.27■■■□□ 2.28
GTF3C4-202ENST00000483873 TTLL13PA6NNM8 815 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 TBKBP1A7MCY6 615 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms